RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 KCNS3Q9BQ31 491 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CHCHD6Q9BRQ6 235 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 GPR62Q9BZJ7 368 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CNGB3Q9NQW8 809 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 OSER1Q9NX31 292 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 C6orf203Q9P0P8 240 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 EFR3BQ9Y2G0 817 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PCDHB7Q9Y5E2 793 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 A0A087WXM4 84 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ANTXRLA6NF34 631 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TCAF2A6NFQ2 919 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 KPNA3O00505 521 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 NME4O00746 187 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 FAM189A1O60320 539 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CDK14O94921 469 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PIGRP01833 764 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ASLP04424 464 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 IRS1P35568 1242 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 RXRGP48443 463 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 POLR2JP52435 117 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 NTHL1P78549 312 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PMS2P3Q13401 168 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CYP2A13Q16696 494 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 GSTA3Q16772 222 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 FAM98BQ52LJ0 330 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TRMT11Q7Z4G4 463 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 EGFL6Q8IUX8 553 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 CAMKK1Q8N5S9 505 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ARL14EPQ8N8R7 260 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ACMSDQ8TDX5 336 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 RORBQ92753 470 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TMBIM1Q969X1 311 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PANX1Q96RD7 426 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 BDH2Q9BUT1 245 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ASPSCR1Q9BZE9 553 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 FAM192AQ9GZU8 254 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ABCC13Q9NSE7 274 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 PNPLA3Q9NST1 481 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 RIC8BQ9NVN3 520 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 LMCD1Q9NZU5 365 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 IFT80Q9P2H3 777 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 OPTCQ9UBM4 332 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TRPC4Q9UBN4 977 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 AGO1Q9UL18 857 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ZNF490Q9ULM2 529 aaPredicted RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 SAMHD1Q9Y3Z3 626 aaKnown RBP4.92□□□□□ -1.62
CCDC39-204ENST00000476379 TRPV2Q9Y5S1 764 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 WDR90Q96KV7 1748 aa4.92□□□□□ -1.62
CCDC39-204ENST00000476379 ULK1O75385 1050 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 DEAF1O75398 565 aaPredicted RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 WDR47O94967 919 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PRAMEF1O95521 474 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CLTBP09497 229 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TYMPP19971 482 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SERPINB1P30740 379 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RGRP47804 291 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SLC18A1P54219 525 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 NKX3-2P78367 333 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MERTKQ12866 999 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SMN1Q16637 294 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 TXNDC8Q6A555 127 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PDE12Q6L8Q7 609 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ABRAXAS1Q6UWZ7 409 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PAQR9Q6ZVX9 377 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 LYSMD3Q7Z3D4 306 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ZDHHC17Q8IUH5 632 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CMTR2Q8IYT2 770 aaKnown RBP4.91□□□□□ -1.62
CCDC39-204ENST00000476379 LIX1Q8N485 282 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 LRRC52Q8N7C0 313 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 KDM1BQ8NB78 822 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PIK3C3Q8NEB9 887 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 OR7A2PQ8NGA2 310 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 POF1BQ8WVV4 589 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SORCS1Q8WY21 1168 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 KLK6Q92876 244 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MAL2Q969L2 176 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 LRRC58Q96CX6 371 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MRGPRX2Q96LB1 330 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 IL4I1Q96RQ9 567 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 HEPHQ9BQS7 1158 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 YIPF4Q9BSR8 244 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 POLG2Q9UHN1 485 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 MAP4K5Q9Y4K4 846 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ASB1Q9Y576 335 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 RAI2Q9Y5P3 530 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 PMF1-BGLAPU3KQ54 211 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 EVPLLA8MZ36 301 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 G3V2T6 193 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 ABLIM1O14639 778 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 IRAK2O43187 625 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 FBXO21O94952 628 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SOX14O95416 240 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 SERPINA1P01009 418 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CYBBP04839 570 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 FYNP06241 537 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 COX7A2P14406 83 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 EPORP19235 508 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CCNA2P20248 432 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 CD247P20963 164 aa4.91□□□□□ -1.62
CCDC39-204ENST00000476379 GTF2E2P29084 291 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms