RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 H0YCG3 227 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CTDSPLO15194 276 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PLPP2O43688 288 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TSPAN1O60635 241 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 FZD7O75084 574 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 MOSPD3O75425 235 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CREG1O75629 220 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PTBP3O95758 552 aaKnown RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 GPR89BP0CG08 455 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TPBGLP0DKB5 382 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PDHBP11177 359 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 UNGP13051 313 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PRG2P13727 222 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 NCF1P14598 390 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 VCLP18206 1134 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 LBPP18428 481 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 HOXC9P31274 260 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PEX19P40855 299 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 FRKP42685 505 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PTH2RP49190 550 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CXCR3P49682 368 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TFF2Q03403 129 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 MRPL28Q13084 256 aaKnown RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PKP1Q13835 747 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CDO1Q16878 200 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ZXDCQ2QGD7 858 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF789Q5FWF6 425 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TCTE1Q5JU00 501 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ALS2CLQ60I27 953 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 MIS18BP1Q6P0N0 1132 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 BRAT1Q6PJG6 821 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TRILQ7L0X0 811 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TRAPPC11Q7Z392 1133 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ARMC9Q7Z3E5 817 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CACNA2D4Q7Z3S7 1137 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TMEM110Q86TL2 294 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 LDLRAD3Q86YD5 345 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 MAML2Q8IZL2 1156 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 SLC25A41Q8N5S1 370 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 GMCL1P1Q8NEA9 526 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 EXOC6Q8TAG9 804 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 FAM216AQ8WUB2 273 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 RIT1Q92963 219 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 SLAMF9Q96A28 289 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CDCA5Q96FF9 252 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 NSMCE2Q96MF7 247 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 SFXN2Q96NB2 322 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 TXN2Q99757 166 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 FNDC11Q9BVV2 318 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 LSG1Q9H089 658 aaKnown RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 P2RY12Q9H244 342 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 MVB12BQ9H7P6 319 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 NGBQ9NPG2 151 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 PRMT8Q9NR22 394 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CYSLTR2Q9NS75 346 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ACSS1Q9NUB1 689 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 FAM118AQ9NWS6 357 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ANKRD10Q9NXR5 420 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 RCOR1Q9UKL0 485 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 CCPG1Q9ULG6 757 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 UNC13AQ9UPW8 1703 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 NPHP3Q7Z494 1330 aa4.11□□□□□ -1.75
VPS13D-207ENST00000476169 ZNF335Q9H4Z2 1342 aaPredicted RBP4.11□□□□□ -1.75
VPS13D-207ENST00000476169 KIR2DS5A0A0G2JLQ3 304 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 CLRN2A0PK11 232 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 LRRC3CA6NJW4 275 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 SDR42E2A6NKP2 422 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 LINC01548A6NM66 108 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 KIR2DS3K7RE56 304 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 CACNB4O00305 520 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 AP5Z1O43299 807 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 PPIP5K2O43314 1243 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 NME6O75414 186 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 C1QL1O75973 258 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 DIRAS3O95661 229 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 EGFP01133 1207 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 FGBP02675 491 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 KRT5P13647 590 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 RPS2P15880 293 aaKnown RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 TCF4P15884 667 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 HOXD9P28356 352 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 PBLDP30039 288 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 MAGEA4P43358 317 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 ASMTP46597 345 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 SERPINH1P50454 418 aaKnown RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 ARFIP1P53367 373 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 UCP2P55851 309 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 HNRNPKP61978 463 aaKnown RBP eCLIP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 CFHR1Q03591 330 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 FOLH1Q04609 750 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 SPOCK1Q08629 439 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 NEDD9Q14511 834 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 MIDNQ504T8 468 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 LBHQ53QV2 105 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 TAF1BQ53T94 588 aaPredicted RBP4.1□□□□□ -1.75
VPS13D-207ENST00000476169 DCAF12L2Q5VW00 463 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 GGNBP1Q5YKI7 109 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 SLC25A24Q6NUK1 477 aa4.1□□□□□ -1.75
VPS13D-207ENST00000476169 PODNL1Q6PEZ8 512 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms