RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 CCNYL2Q5T2Q4 361 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 GPR158Q5T848 1215 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 PIK3R6Q5UE93 754 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 DLEU7Q6UYE1 221 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 EFL1Q7Z2Z2 1120 aaKnown RBP6.78□□□□□ -1.32
UBR4-212ENST00000475973 BMP8AQ7Z5Y6 402 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 GPR141Q7Z602 305 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 TFAP2DQ7Z6R9 452 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 ZNF554Q86TJ5 538 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 PROSER1Q86XN7 944 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 ZNF280BQ86YH2 543 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 UBALD2Q8IYN6 164 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 KIAA2013Q8IYS2 634 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 MIER2Q8N344 545 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 PGBD5Q8N414 524 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 SPATA6LQ8N4H0 392 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 TRIML2Q8N7C3 387 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 MIPOL1Q8TD10 442 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 BCL7CQ8WUZ0 217 aaPredicted RBP6.78□□□□□ -1.32
UBR4-212ENST00000475973 TWIST2Q8WVJ9 160 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 TRUB1Q8WWH5 349 aaKnown RBP6.78□□□□□ -1.32
UBR4-212ENST00000475973 BORCS5Q969J3 196 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 HDAC10Q969S8 669 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 ACDQ96AP0 544 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 PDLIM5Q96HC4 596 aaKnown RBP6.78□□□□□ -1.32
UBR4-212ENST00000475973 ZFP42Q96MM3 310 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 DACH2Q96NX9 599 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 HHIPQ96QV1 700 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 SLC30A3Q99726 388 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 SEMA6AQ9H2E6 1030 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 ACTL8Q9H568 366 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 CAAP1Q9H8G2 361 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 GORASP2Q9H8Y8 452 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 CXorf21Q9HAI6 301 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 MAGEE1Q9HCI5 957 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.78□□□□□ -1.32
UBR4-212ENST00000475973 RIC8BQ9NVN3 520 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 MARCH5Q9NX47 278 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 ASIC5Q9NY37 505 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 GTSE1Q9NYZ3 720 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 EBF1Q9UH73 591 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 POLG2Q9UHN1 485 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 DSEQ9UL01 958 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 ZNF232Q9UNY5 417 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 SCML2Q9UQR0 700 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 TLR6Q9Y2C9 796 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 CCL27Q9Y4X3 112 aa6.78□□□□□ -1.32
UBR4-212ENST00000475973 TRBV5-3A0A0A0MS03 114 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 A0A1B0GTL3 188 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 C2CD4DB7Z1M9 353 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 NPIPB8E9PQR5 432 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 H7C0S8 307 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 TMEM189-UBE2V1I3L0A0 370 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 IFRD1O00458 451 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 PPP6CO00743 305 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 FZD6O60353 706 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 TULP3O75386 442 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SULT1C4O75897 302 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 ALPLP05186 524 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 FGF1P05230 155 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 UGT2B4P06133 528 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 CNPP09543 421 aaKnown RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 HAPLN1P10915 354 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 MBL2P11226 248 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 CDH1P12830 882 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 EPCAMP16422 314 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 HOXB9P17482 250 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 CR2P20023 1033 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 TCN1P20061 433 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 IL12AP29459 219 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 HMOX2P30519 316 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 OXTRP30559 389 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 POLR2IP36954 125 aaKnown RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 RANBP1P43487 201 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 STT3AP46977 705 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 ENTPD1P49961 510 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 CLCN4P51793 760 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 CLCNKBP51801 687 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SLC12A2P55011 1212 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 CDH15P55291 814 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 GABARAPL2P60520 117 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 PLOD1Q02809 727 aaPredicted RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 DSC1Q08554 894 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 ELAVL2Q12926 359 aaKnown RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 LCP2Q13094 533 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 PMS2P3Q13401 168 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SEMA3AQ14563 771 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 RAB39AQ14964 217 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SMAD1Q15797 465 aaKnown RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 ZC3H12BQ5HYM0 836 aaKnown RBP6.77□□□□□ -1.33
UBR4-212ENST00000475973 PAGE3Q5JUK9 113 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 SIRPB2Q5JXA9 342 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 CLEC6AQ6EIG7 209 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 LAIR2Q6ISS4 152 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 ANKRD26P1Q6NSI1 321 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 FUT10Q6P4F1 479 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 ZNF773Q6PK81 442 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 TXNDC11Q6PKC3 985 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 ABRAXAS1Q6UWZ7 409 aa6.77□□□□□ -1.33
UBR4-212ENST00000475973 TMC5Q6UXY8 1006 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms