RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 UNC79Q9P2D8 2635 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 LRBAP50851 2863 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 MACROD2A1Z1Q3 448 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CDC14CA4D256 554 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 MGAT4DA6NG13 374 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 SLC9B1P1A6NJY1 282 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 PJA2O43164 708 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 ZW10O43264 779 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 SRP72O76094 671 aaKnown RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 FTCDO95954 541 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 TPM1P09493 284 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 MTHFD1P11586 935 aaKnown RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 FGF5P12034 268 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 ETS1P14921 441 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 PVRP15151 417 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 POLR2CP19387 275 aaPredicted RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 HLA-DPA1P20036 260 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 MSH3P20585 1137 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 LPOP22079 712 aaPredicted RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 PREPP48147 710 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 KPNA2P52292 529 aaKnown RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 ZNF140P52738 457 aaPredicted RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 RAB15P59190 212 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 DMPKQ09013 629 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 ABHD18Q0P651 414 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CHAF1BQ13112 559 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 LAMB3Q13751 1172 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CCDC38Q502W7 563 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 LDLRAP1Q5SW96 308 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CPZQ66K79 652 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CAPRIN2Q6IMN6 1127 aaKnown RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 DARS2Q6PI48 645 aaKnown RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 PRSS42Q7Z5A4 293 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 RASGRP3Q8IV61 690 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 FAM20CQ8IXL6 584 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 GLIS1Q8NBF1 620 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CCDC112Q8NEF3 446 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 ATG4AQ8WYN0 398 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 DNAJC1Q96KC8 554 aaKnown RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 C12orf66Q96MD2 445 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 TTC25Q96NG3 672 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 TEFMQ96QE5 360 aaKnown RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 TRABDQ9H4I3 376 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 RAD18Q9NS91 495 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 HRASLS2Q9NWW9 162 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 SEMA5BQ9P283 1151 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 EPHA6Q9UF33 1036 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CIDEBQ9UHD4 219 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 SLC24A2Q9UI40 661 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 LNPEPQ9UIQ6 1025 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 TRHDEQ9UKU6 1024 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 PLAAQ9Y263 795 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 HEMK1Q9Y5R4 338 aaPredicted RBP7.88□□□□□ -1.15
USP48-207ENST00000471752 KCNMB2Q9Y691 235 aa7.88□□□□□ -1.15
USP48-207ENST00000471752 CRYBG3Q68DQ2 2970 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 SEC16AO15027 2179 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 MED13Q9UHV7 2174 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 PIPSLA2A3N6 862 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 CCDC66A2RUB6 948 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 OR5K3A6NET4 321 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 AGAP14A8MT82 685 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 HACD1B0YJ81 288 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 GPR89AB7ZAQ6 455 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 PPFIA2O75334 1257 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 GPR89BP0CG08 455 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 SLC2A4P14672 509 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 TCN2P20062 427 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 CTNNA2P26232 953 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 AKT1P31749 480 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 CCR10P46092 362 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 CSRP3P50461 194 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 MLLT10P55197 1068 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 ABRQ12979 859 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 GPS2Q13227 327 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 PRKG2Q13237 762 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 XRCC4Q13426 336 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 IL10RAQ13651 578 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 GTF2H3Q13889 308 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 BRD3Q15059 726 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 TAF1AQ15573 450 aaPredicted RBP7.87□□□□□ -1.15
USP48-207ENST00000471752 ZIC1Q15915 447 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 CCDC181Q5TID7 509 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 KCTD11Q693B1 232 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 HIST2H2BCQ6DN03 193 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 ATG14Q6ZNE5 492 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 BZW1Q7L1Q6 419 aaKnown RBP7.87□□□□□ -1.15
USP48-207ENST00000471752 TRIM73Q86UV7 250 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 SERPINA9Q86WD7 417 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 KLHDC8BQ8IXV7 354 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 CCDC170Q8IYT3 715 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 NXPE1Q8N323 547 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 AMER2Q8N7J2 671 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 OR2L2Q8NH16 312 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 OR1L3Q8NH93 324 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 DTX3LQ8TDB6 740 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 BRSK1Q8TDC3 778 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 ZDHHC12Q96GR4 267 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 ZNF778Q96MU6 729 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 SPATA13Q96N96 652 aa7.87□□□□□ -1.15
USP48-207ENST00000471752 TBL1YQ9BQ87 522 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms