RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 OGG1O15527 345 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 TMCC2O75069 709 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 GPC4O75487 556 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 AP2A2O94973 939 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 MOCS3O95396 460 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 IGHV4-59P01825 116 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 EDN1P05305 212 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 H1F0P07305 194 aaKnown RBP3.33□□□□□ -1.88
RBM39-228ENST00000471635 ATP1A3P13637 1013 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 NFKBIAP25963 317 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 ACADLP28330 430 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 NKX2-1P43699 371 aaPredicted RBP3.33□□□□□ -1.88
RBM39-228ENST00000471635 CCR9P51686 369 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 ENPP2Q13822 863 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 MED22Q15528 200 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 ZRSR2Q15696 482 aaKnown RBP3.33□□□□□ -1.88
RBM39-228ENST00000471635 ACSM2BQ68CK6 577 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 ZNF613Q6PF04 617 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 SMAP1Q8IYB5 467 aaPredicted RBP3.33□□□□□ -1.88
RBM39-228ENST00000471635 BMPERQ8N8U9 685 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 ELMOD3Q96FG2 381 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 AGAP3Q96P47 875 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 GAD1Q99259 594 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 SLC7A10Q9NS82 523 aa3.33□□□□□ -1.88
RBM39-228ENST00000471635 TRMT1Q9NXH9 659 aaKnown RBP3.33□□□□□ -1.88
RBM39-228ENST00000471635 CDC123O75794 336 aaPredicted RBP3.32□□□□□ -1.88
RBM39-228ENST00000471635 ACP2P11117 423 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 CEBPBP17676 345 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 KRT9P35527 623 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 SNX16P57768 344 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 RPS3AP61247 264 aaKnown RBP3.32□□□□□ -1.88
RBM39-228ENST00000471635 HNRNPDQ14103 355 aaKnown RBP3.32□□□□□ -1.88
RBM39-228ENST00000471635 P2RY6Q15077 328 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 ZSCAN23Q3MJ62 389 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 CYP4A22Q5TCH4 519 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 CORO6Q6QEF8 472 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 HACE1Q8IYU2 909 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 MAGED4Q96JG8 741 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 C1orf74Q96LT6 269 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 ZNF582Q96NG8 517 aaPredicted RBP3.32□□□□□ -1.88
RBM39-228ENST00000471635 SYT15Q9BQS2 421 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 SLA2Q9H6Q3 261 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 JMJD4Q9H9V9 463 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 SETD4Q9NVD3 440 aa3.32□□□□□ -1.88
RBM39-228ENST00000471635 COL5A2P05997 1499 aaPredicted RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 IGKV6D-41A0A0C4DH26 115 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 EIF2S1P05198 315 aaKnown RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 CLEC3BP05452 202 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 GATA1P15976 413 aaPredicted RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 PPP2R2BQ00005 443 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 CDR2Q01850 454 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 GPR17Q13304 367 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 EIF4A2Q14240 407 aaKnown RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 TSTQ16762 297 aaKnown RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 SNAI3Q3KNW1 292 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 ADALQ6DHV7 355 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 DOK6Q6PKX4 331 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 CPLX4Q7Z7G2 160 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 KBTBD8Q8NFY9 601 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 DAZLQ92904 295 aaKnown RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 ARHGEF2Q92974 986 aaKnown RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 NSL1Q96IY1 281 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 MYADMQ96S97 322 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 DDOQ99489 341 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 HGH1Q9BTY7 390 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 TRAF4Q9BUZ4 470 aaPredicted RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 LAT2Q9GZY6 243 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 SMC4Q9NTJ3 1288 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 EHD2Q9NZN4 543 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 SPIN1Q9Y657 262 aaPredicted RBP3.31□□□□□ -1.88
RBM39-228ENST00000471635 ADAMTS9Q9P2N4 1935 aa3.31□□□□□ -1.88
RBM39-228ENST00000471635 DUS4LO95620 317 aaKnown RBP3.3□□□□□ -1.88
RBM39-228ENST00000471635 TMEM11P17152 192 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 SLC8A3P57103 927 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 LGALS3BPQ08380 585 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 GAGE2BQ13066 116 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 PLA2G7Q13093 441 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 UGP2Q16851 508 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 GAGE2EQ4V326 116 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 DCAF10Q5QP82 559 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 GAGE2AQ6NT46 116 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 TRIM65Q6PJ69 517 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 ZNF554Q86TJ5 538 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 OR2T11Q8NH01 316 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 ZNRF4Q8WWF5 429 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 ZNF300Q96RE9 604 aaPredicted RBP3.3□□□□□ -1.88
RBM39-228ENST00000471635 PKP2Q99959 881 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 FGFBP2Q9BYJ0 223 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 P2RY12Q9H244 342 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 INTS9Q9NV88 658 aaKnown RBP3.3□□□□□ -1.88
RBM39-228ENST00000471635 GAGE2DQ9UEU5 116 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 PNMA2Q9UL42 364 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 MTMR6Q9Y217 621 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 ZHX2Q9Y6X8 837 aa3.3□□□□□ -1.88
RBM39-228ENST00000471635 PLEKHD1A6NEE1 506 aa3.29□□□□□ -1.88
RBM39-228ENST00000471635 SCAMP1O15126 338 aa3.29□□□□□ -1.88
RBM39-228ENST00000471635 RTN3O95197 1032 aaPredicted RBP3.29□□□□□ -1.88
RBM39-228ENST00000471635 CCNDBP1O95273 360 aa3.29□□□□□ -1.88
RBM39-228ENST00000471635 ACTN1P12814 892 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms