RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 WWP1Q9H0M0 922 aa13.75□□□□□ -0.21
COMMD3-208ENST00000470045 CASS4Q9NQ75 786 aa13.75□□□□□ -0.21
COMMD3-208ENST00000470045 EIF2B3Q9NR50 452 aaKnown RBP13.75□□□□□ -0.21
COMMD3-208ENST00000470045 RAB6BQ9NRW1 208 aa13.75□□□□□ -0.21
COMMD3-208ENST00000470045 IMP3Q9NV31 184 aaKnown RBP13.75□□□□□ -0.21
COMMD3-208ENST00000470045 KLHL3Q9UH77 587 aa13.75□□□□□ -0.21
COMMD3-208ENST00000470045 KALRNO60229 2985 aa13.75□□□□□ -0.21
COMMD3-208ENST00000470045 HEATR9A2RTY3 570 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 GSTM1P09488 218 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 SLC35G4P0C7Q5 338 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 MSNP26038 577 aaKnown RBP13.74□□□□□ -0.21
COMMD3-208ENST00000470045 RPL22P35268 128 aaKnown RBP13.74□□□□□ -0.21
COMMD3-208ENST00000470045 GSTM4Q03013 218 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 ITIH4Q14624 930 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 SKIDA1Q1XH10 827 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 CCDC38Q502W7 563 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 DUS1LQ6P1R4 473 aaKnown RBP13.74□□□□□ -0.21
COMMD3-208ENST00000470045 CEACAM20Q6UY09 585 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 PACS1Q6VY07 963 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 VASH2Q86V25 355 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 CCDC89Q8N998 374 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 DNAAF3Q8N9W5 541 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 KLHL6Q8WZ60 621 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 PEX13Q92968 403 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 C12orf66Q96MD2 445 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 ZPBPQ9BS86 351 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 CCM2Q9BSQ5 444 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 KIR3DX1Q9H7L2 352 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 COG4Q9H9E3 785 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 APMAPQ9HDC9 416 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 SLC24A2Q9UI40 661 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 PILRAQ9UKJ1 303 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 PCDHB11Q9Y5F2 797 aa13.74□□□□□ -0.21
COMMD3-208ENST00000470045 SMG1Q96Q15 3661 aaKnown RBP13.74□□□□□ -0.21
COMMD3-208ENST00000470045 ATRXP46100 2492 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 CCDC78A2IDD5 438 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 CCDC162PA2VCL2 907 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 E7EVH7 732 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 KIF1CO43896 1103 aaKnown RBP13.73□□□□□ -0.21
COMMD3-208ENST00000470045 AP2A2O94973 939 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 GAS8O95995 478 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 APRTP07741 180 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 ZSCAN5DPP0CG00 497 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 WT1P19544 449 aaPredicted RBP13.73□□□□□ -0.21
COMMD3-208ENST00000470045 ADRA1DP25100 572 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 LAMB3Q13751 1172 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 MANEAQ5SRI9 462 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 TSTD2Q5T7W7 516 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 KLHL35Q6PF15 583 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 C4orf22Q6V702 233 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 PPP1R21Q6ZMI0 780 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 CLDN19Q8N6F1 224 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 ZDHHC12Q96GR4 267 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 SGSM3Q96HU1 749 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 ZNF778Q96MU6 729 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 OR52A5Q9H2C5 316 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 VPS37BQ9H9H4 285 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 GRPEL1Q9HAV7 217 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 FAM8A1Q9UBU6 413 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 TCAF1Q9Y4C2 921 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 TMEM184BQ9Y519 407 aaPredicted RBP13.73□□□□□ -0.21
COMMD3-208ENST00000470045 PCDHGA4Q9Y5G9 962 aa13.73□□□□□ -0.21
COMMD3-208ENST00000470045 CFAP20Q9Y6A4 193 aaKnown RBP13.73□□□□□ -0.21
COMMD3-208ENST00000470045 CFAP46Q8IYW2 2715 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 OR5K3A6NET4 321 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 OR51F1A6NGY5 319 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 CEP104O60308 925 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 RAD1O60671 282 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 DLGAP3O95886 979 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 NDUFS1P28331 727 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 CXCR5P32302 372 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 NSG1P42857 185 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 ATP1A2P50993 1020 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 PPP1CAP62136 330 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 RPA4Q13156 261 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 PLCL1Q15111 1095 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 KIAA1614Q5VZ46 1190 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 IRGCQ6NXR0 463 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 AFTPHQ6ULP2 937 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 TAS2R42Q7RTR8 314 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 CFAP206Q8IYR0 622 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 RASGEF1CQ8N431 466 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 PRELID2Q8N945 189 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 JPH3Q8WXH2 748 aaPredicted RBP13.72□□□□□ -0.21
COMMD3-208ENST00000470045 SLC41A2Q96JW4 573 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 CD180Q99467 661 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 CTRCQ99895 268 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 HOMER3Q9NSC5 361 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 SLC2A6Q9UGQ3 507 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 HEBP2Q9Y5Z4 205 aa13.72□□□□□ -0.21
COMMD3-208ENST00000470045 GOLGA6L3A6NEY3 463 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 QSOX1O00391 747 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 POLR1CO15160 346 aaPredicted RBP13.71□□□□□ -0.21
COMMD3-208ENST00000470045 RASSF9O75901 435 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 C1QL1O75973 258 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 GOT2P00505 430 aaKnown RBP13.71□□□□□ -0.21
COMMD3-208ENST00000470045 POLBP06746 335 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 NELFEP18615 380 aaKnown RBP13.71□□□□□ -0.21
COMMD3-208ENST00000470045 KCNJ1P48048 391 aa13.71□□□□□ -0.21
COMMD3-208ENST00000470045 CD151P48509 253 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms