RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 VAPAQ9P0L0 249 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF840PA6NDX5 716 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 H7C4K7 107 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 CBX4O00257 560 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TAPBPO15533 448 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 SEC14L2O76054 403 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 STC2O76061 302 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 THRBP10828 461 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TCF3P15923 654 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 SOX11P35716 441 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 HMGCLP35914 325 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 SLC11A1P49279 550 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 DGKQP52824 942 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TUBA3CQ13748 450 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 PLCL1Q15111 1095 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 PTPRRQ15256 657 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 NR6A1Q15406 480 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 RBM48Q5RL73 367 aaKnown RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 METTL2BQ6P1Q9 378 aaKnown RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TMEM26Q6ZUK4 368 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 FAM126BQ8IXS8 530 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TBC1D15Q8TC07 691 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 GTF2H4Q92759 462 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 UPF1Q92900 1129 aaKnown RBP eCLIP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 PIF1Q9H611 641 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 CARS2Q9HA77 564 aaKnown RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 MAGEE1Q9HCI5 957 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TBCCD1Q9NVR7 557 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 USE1Q9NZ43 259 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 OARD1Q9Y530 152 aa13.43□□□□□ -0.26
BRCA1-209ENST00000470026 POLR3HQ9Y535 204 aaPredicted RBP13.43□□□□□ -0.26
BRCA1-209ENST00000470026 TMX2-CTNND1H3BSU7 103 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 GAPDHSO14556 408 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 RAD51BO15315 384 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 COCHO43405 550 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 PFDN1O60925 122 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 KCNH1O95259 989 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ALDH2P05091 517 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 TMBIM6P55061 237 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 CHRNB3Q05901 458 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ELAVL2Q12926 359 aaKnown RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 INO80DQ53TQ3 878 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ANKS3Q6ZW76 656 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ITIH5Q86UX2 942 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 PLPP6Q8IY26 295 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 GLB1L3Q8NCI6 653 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 UBTD2Q8WUN7 234 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 SLC13A3Q8WWT9 602 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 TANKQ92844 425 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 HSPBAP1Q96EW2 488 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 FEM1AQ9BSK4 669 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 DCUN1D5Q9BTE7 237 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 UGT2B28Q9BY64 529 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 IPPKQ9H8X2 491 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 FAIMQ9NVQ4 179 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 FAF1Q9UNN5 650 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 V9GYQ6 96 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF106Q9H2Y7 1883 aaKnown RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 CASP8AP2Q9UKL3 1982 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 TRBV5-3A0A0A0MS03 114 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 A0A1W2PPW3 197 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 GOLGA8CPA6NN73 597 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 DFNA5O60443 496 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 WDR47O94967 919 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 PRAMEF12O95522 483 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 SLC10A3P09131 477 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 CNPP09543 421 aaKnown RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ELK4P28324 431 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 CORO1AP31146 461 aaKnown RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 YAP1P46937 504 aaKnown RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ACLYP53396 1101 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 PPP2R2BQ00005 443 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 EPS8Q12929 822 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 NKG7Q16617 165 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 AAK1Q2M2I8 961 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ZNF829Q3KNS6 432 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 FGD3Q5JSP0 725 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 OTUD3Q5T2D3 398 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 HECTD3Q5T447 861 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ADGRF1Q5T601 910 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 RNF219Q5W0B1 726 aaPredicted RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 XAF1Q6GPH4 301 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 SULT1C3Q6IMI6 304 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 FRA10AC1Q70Z53 315 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 TAS2R42Q7RTR8 314 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 TRIM46Q7Z4K8 759 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 NECAB2Q7Z6G3 386 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 THAP5Q7Z6K1 395 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 MILR1Q7Z6M3 343 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 MSRB3Q8IXL7 192 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 NUDT8Q8WV74 236 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 OSBPL10Q9BXB5 764 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 NAA50Q9GZZ1 169 aaKnown RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 SARS2Q9NP81 518 aaKnown RBP13.42□□□□□ -0.26
BRCA1-209ENST00000470026 ELOVL2Q9NXB9 296 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 DNAJB9Q9UBS3 223 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 STOML2Q9UJZ1 356 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 AP3M1Q9Y2T2 418 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 PKP3Q9Y446 797 aa13.42□□□□□ -0.26
BRCA1-209ENST00000470026 SLC28A1O00337 649 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms