RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 E2F3O00716 465 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 SDHDO14521 159 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 AP1G1O43747 822 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 NUAK1O60285 661 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 ATG13O75143 517 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 TM7SF2O76062 418 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 DRD1P21728 446 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 PRLHRP49683 370 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 TMEM220Q6QAJ8 160 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 ASRGL1Q7L266 308 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 AGAP11Q8TF27 550 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 ASZ1Q8WWH4 475 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 HGH1Q9BTY7 390 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 TUBB6Q9BUF5 446 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 ESRRAP11474 423 aaPredicted RBP17.8■□□□□ 0.44
SMC4-211ENST00000469858 COL9A1P20849 921 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 CALB2P22676 271 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 PBLDP30039 288 aaPredicted RBP17.8■□□□□ 0.44
SMC4-211ENST00000469858 NAA20P61599 178 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 KCNJ2P63252 427 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 RBBP7Q16576 425 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 SYTL3Q4VX76 610 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 METTL21CQ5VZV1 264 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 CLYBLQ8N0X4 340 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 PLCD3Q8N3E9 789 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 PLA2G15Q8NCC3 412 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 PPM1EQ8WY54 764 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 SLC7A6OSQ96CW6 309 aaPredicted RBP17.8■□□□□ 0.44
SMC4-211ENST00000469858 KCNA7Q96RP8 456 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 ZCCHC2Q9C0B9 1178 aaKnown RBP17.8■□□□□ 0.44
SMC4-211ENST00000469858 OR2AG1Q9H205 316 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 FBXL12Q9NXK8 326 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 PRDM4Q9UKN5 801 aa17.8■□□□□ 0.44
SMC4-211ENST00000469858 TNPO3Q9Y5L0 923 aaKnown RBP17.8■□□□□ 0.44
SMC4-211ENST00000469858 A0A1W2PQF6 199 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 AZIN1O14977 448 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 DCXO43602 365 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 NARSO43776 548 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 MLYCDO95822 493 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 DNTTP04053 509 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 PCCBP05166 539 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 HSPA7P48741 367 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 RASSF2P50749 326 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 FOXA1P55317 472 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 PCBP2Q15366 365 aaKnown RBP eCLIP17.79■□□□□ 0.44
SMC4-211ENST00000469858 TBCCQ15814 346 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 MBOAT1Q6ZNC8 495 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 UBE2R2Q712K3 238 aaPredicted RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 TMPRSS6Q8IU80 811 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 C10orf67Q8IYJ2 551 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 KCNV2Q8TDN2 545 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 STON2Q8WXE9 905 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 MAELQ96JY0 434 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 CCDC28BQ9BUN5 200 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 PHF7Q9BWX1 381 aaPredicted RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 LRMDAQ9H2I8 198 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 MEAF6Q9HAF1 191 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 RDH14Q9HBH5 336 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 WWOXQ9NZC7 414 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 PTBP2Q9UKA9 531 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 G3BP2Q9UN86 482 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 ZFC3H1O60293 1989 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 PRR23AA6NEV1 266 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 HNRNPCL1O60812 293 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 CRCPO75575 148 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 FGF4P08620 206 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 MPC1LP0DKB6 136 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 AOC1P19801 751 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 PRDX3P30048 256 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 CPA2P48052 419 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 TMEM198Q66K66 360 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 TRMT11Q7Z4G4 463 aaKnown RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 ADGRG6Q86SQ4 1221 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 NLRP8Q86W28 1048 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 TRAPPC5Q8IUR0 188 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 OR56A4Q8NGH8 313 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 LENG8Q96PV6 779 aaPredicted RBP17.79■□□□□ 0.44
SMC4-211ENST00000469858 CCM2Q9BSQ5 444 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 LNPEPQ9UIQ6 1025 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 PDE10AQ9Y233 779 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 DNAJC15Q9Y5T4 150 aa17.79■□□□□ 0.44
SMC4-211ENST00000469858 NUMA1Q14980 2115 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 CFAP73A6NFT4 308 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 GIPC1O14908 333 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 TAPBPO15533 448 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 GPC4O75487 556 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 C8GP07360 202 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 RPIAP49247 311 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 UGT3A2Q3SY77 523 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 KANK2Q63ZY3 851 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 SULT1C3Q6IMI6 304 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 SYVN1Q86TM6 617 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 LILRA3Q8N6C8 439 aaPredicted RBP17.78■□□□□ 0.44
SMC4-211ENST00000469858 ASB11Q8WXH4 323 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 TMEM159Q96B96 161 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 RHBDF1Q96CC6 855 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 FBRSQ9HAH7 460 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 TRIM39Q9HCM9 518 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 ATXN10Q9UBB4 475 aa17.78■□□□□ 0.44
SMC4-211ENST00000469858 TAGLN3Q9UI15 199 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms