RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SLC5A2P31639 672 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 TTPAP49638 278 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 CCR3P51677 355 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 ERVPABLB-1P60509 514 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 XIAPP98170 497 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 ACVR1Q04771 509 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 PPP1R8Q12972 351 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 TSTA3Q13630 321 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 NFYCQ13952 458 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 NR6A1Q15406 480 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SLC14A2Q15849 920 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 TYSND1Q2T9J0 566 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 MYLK3Q32MK0 819 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 ZCCHC8Q6NZY4 707 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 NANOGNBQ7Z5D8 188 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SETD3Q86TU7 594 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 CROCCP3Q8IVE0 287 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 FOXJ1Q92949 421 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 VWCEQ96DN2 955 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 ZNF599Q96NL3 588 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SLC25A23Q9BV35 468 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 TFB2MQ9H5Q4 396 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 COQ10BQ9H8M1 238 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 IL26Q9NPH9 171 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 INTS7Q9NVH2 962 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 UBAP1Q9NZ09 502 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 IL17CQ9P0M4 197 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 EPS15L1Q9UBC2 864 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 INTS6Q9UL03 887 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 AP4S1Q9Y587 144 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 ANGPTL3Q9Y5C1 460 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SH3PXD2BA1X283 911 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 NPIPB15A6NHN6 443 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 ACOT8O14734 319 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 PRMT5O14744 637 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 INPP4BO15327 924 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 CBFA2T3O75081 653 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 WISP3O95389 354 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 GNRH1P01148 92 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 C8AP07357 584 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 PCNAP12004 261 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 CCR2P41597 374 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 NAA20P61599 178 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 BOP1Q14137 746 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 C6orf10Q5SRN2 563 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 RARS2Q5T160 578 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 PLPP4Q5VZY2 271 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SLC2A7Q6PXP3 512 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 Q6ZVU0 165 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 RBM23Q86U06 439 aaKnown RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SLC39A11Q8N1S5 342 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 RNF175Q8N4F7 328 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 BEND7Q8N7W2 519 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 CDC26Q8NHZ8 85 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 RIN3Q8TB24 985 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 CYB5D2Q8WUJ1 264 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SCAMP4Q969E2 229 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 L3HYPDHQ96EM0 354 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SLC29A1Q99808 456 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SOX17Q9H6I2 414 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 IL21Q9HBE4 155 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 SPG21Q9NZD8 308 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 HECAQ9UBI9 543 aaPredicted RBP9.29□□□□□ -0.92
TOP3A-203ENST00000469739 AP4B1Q9Y6B7 739 aa9.29□□□□□ -0.92
TOP3A-203ENST00000469739 HIDE1A8MVS5 230 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 LSM1O15116 133 aaKnown RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 CXCL14O95715 111 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 PTGR1Q14914 329 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 CPSF6Q16630 551 aaKnown RBP eCLIP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 GPRIN3Q6ZVF9 776 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 CHSY3Q70JA7 882 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 HJURPQ8NCD3 748 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 CHST14Q8NCH0 376 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 OR10Q1Q8NGQ4 319 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 DLG3Q92796 817 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 TOP1MTQ969P6 601 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 FAR2Q96K12 515 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 PRPF18Q99633 342 aaKnown RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 SLC46A2Q9BY10 475 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 PCTPQ9UKL6 214 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 PER2O15055 1255 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 BCAS2O75934 225 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 B3GALT4O96024 378 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 BPIP17213 487 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 NEK2P51955 445 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 MTPNP58546 118 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 RPL26P61254 145 aaKnown RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 RELAQ04206 551 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 SMARCB1Q12824 385 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 ADGRE1Q14246 886 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 DHFR2Q86XF0 187 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 OR4F6Q8NGB9 312 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 GPR150Q8NGU9 434 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 C2orf15Q8WU43 125 aaKnown RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 PIH1D2Q8WWB5 315 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 CDK5RAP1Q96SZ6 601 aaKnown RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 C2orf49Q9BVC5 232 aaPredicted RBP9.28□□□□□ -0.92
TOP3A-203ENST00000469739 DERL2Q9GZP9 239 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 IPPKQ9H8X2 491 aa9.28□□□□□ -0.92
TOP3A-203ENST00000469739 INTS10Q9NVR2 710 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms