RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 CREB5Q02930 508 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 MESP2Q0VG99 397 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CAMK2GQ13555 558 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CUL3Q13618 768 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 HTR4Q13639 388 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 BOP1Q14137 746 aaKnown RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 STARD3Q14849 445 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CCDC85BQ15834 202 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 POM121L1PQ3SYA9 428 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 WASHC2DQ5SRD0 308 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 FBXW10Q5XX13 1052 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 ZNF776Q68DI1 518 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 RAET1GQ6H3X3 334 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 SDE2Q6IQ49 451 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 C16orf89Q6UX73 402 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 RINLQ6ZS11 566 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 RFLNAQ6ZTI6 216 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 EP400NLQ6ZTU2 488 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CHSY3Q70JA7 882 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 UBE2R2Q712K3 238 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 RPS27LQ71UM5 84 aaKnown RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 LRRC70Q7Z2Q7 622 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 MMAAQ8IVH4 418 aaKnown RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 DDIASQ8IXT1 998 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CHPFQ8IZ52 775 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 ZNF513Q8N8E2 541 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 TMEM159Q96B96 161 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 MOCOSQ96EN8 888 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CCDC97Q96F63 343 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 ZNF514Q96K75 400 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 HIST1H2AHQ96KK5 128 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 PPP1R36Q96LQ0 422 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CATSPER2Q96P56 530 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 FAM129BQ96TA1 746 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 HIST1H2AJQ99878 128 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 P2RY13Q9BPV8 354 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 RTKNQ9BST9 563 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 H2AFJQ9BTM1 129 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 CADM1Q9BY67 442 aaKnown RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 RSPH9Q9H1X1 276 aaPredicted RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 ZBTB26Q9HCK0 441 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 RIC8BQ9NVN3 520 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 UTP6Q9NYH9 597 aaKnown RBP9.18□□□□□ -0.94
SMC1A-205ENST00000469129 TAS2R1Q9NYW7 299 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 SARDHQ9UL12 918 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 ITM2BQ9Y287 266 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 MTCH2Q9Y6C9 303 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 STON1Q9Y6Q2 735 aa9.18□□□□□ -0.94
SMC1A-205ENST00000469129 ANHXE9PGG2 379 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 K7EPI3 171 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 ARNTLO00327 626 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 GSC2O15499 205 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 SYNCRIPO60506 623 aaKnown RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 RECQL5O94762 991 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 ATP6V1G2O95670 118 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 LMNAP02545 664 aaKnown RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 JUNP05412 331 aaKnown RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 LBPP18428 481 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 C5AR1P21730 350 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 HMOX2P30519 316 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CCR7P32248 378 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 PGM1P36871 562 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 ARL1P40616 181 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 GPR1P46091 355 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CPA2P48052 419 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CCNG1P51959 295 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 SH3BP2P78314 561 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 PLOD1Q02809 727 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 HSPA14Q0VDF9 509 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 GTF2H2Q13888 395 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CYLC2Q14093 348 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 COL19A1Q14993 1142 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CST6Q15828 149 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 BCL7AQ4VC05 210 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CLEC6AQ6EIG7 209 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 GTF2H2CQ6P1K8 395 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 RNF165Q6ZSG1 346 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 DET1Q7L5Y6 550 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 GOLGA7Q7Z5G4 137 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 SMRP1Q8NCR6 262 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 RBM15BQ8NDT2 890 aaKnown RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 FAM13CQ8NE31 585 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 KCNV2Q8TDN2 545 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 SKA2Q8WVK7 121 aaPredicted RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 DNASE1L2Q92874 299 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 ATP6V1E2Q96A05 226 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 MSLNLQ96KJ4 702 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 FOPNLQ96NB1 174 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 NSUN5Q96P11 429 aaKnown RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 MIPEPQ99797 713 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CCM2Q9BSQ5 444 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 SLC12A9Q9BXP2 914 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 PARVBQ9HBI1 364 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CACNA2D2Q9NY47 1150 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 TRPS1Q9UHF7 1281 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 CD207Q9UJ71 328 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 TSR3Q9UJK0 312 aaKnown RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 PTBP2Q9UKA9 531 aaKnown RBP9.17□□□□□ -0.94
SMC1A-205ENST00000469129 TMPRSS11EQ9UL52 423 aa9.17□□□□□ -0.94
SMC1A-205ENST00000469129 DNAJC15Q9Y5T4 150 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms