RNA–Protein interactions for RNA: ENST00000467326.5

VPS50-209, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-209ENST00000467326 SCML4Q8N228 414 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 WDTC1Q8N5D0 677 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 MNS1Q8NEH6 495 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 Q8NFD4 153 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 IPMKQ8NFU5 416 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 OR6J1Q8NGC5 347 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 LNX1Q8TBB1 728 aaPredicted RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 MAGEC3Q8TD91 643 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 GIMAP1Q8WWP7 306 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 PRPF31Q8WWY3 499 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 SHC3Q92529 594 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 METTL2AQ96IZ6 378 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 SLC41A2Q96JW4 573 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 DACH2Q96NX9 599 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 NODALQ96S42 347 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 SH3GL2Q99962 352 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 POLR3CQ9BUI4 534 aaPredicted RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 KCNN2Q9H2S1 579 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 NCOR1P1Q9H4R4 102 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 PCDH9Q9HC56 1237 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 SLC6A13Q9NSD5 602 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 AATFQ9NY61 560 aaKnown RBP eCLIP3.69□□□□□ -1.82
VPS50-209ENST00000467326 TAS2R3Q9NYW6 316 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 SEC63Q9UGP8 760 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 TTC7AQ9ULT0 858 aaPredicted RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 PPIEQ9UNP9 301 aaKnown RBP3.69□□□□□ -1.82
VPS50-209ENST00000467326 AMDHD2Q9Y303 409 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 POMT1Q9Y6A1 747 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 KCNE2Q9Y6J6 123 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 SCN5AQ14524 2016 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 UTYO14607 1347 aa3.69□□□□□ -1.82
VPS50-209ENST00000467326 DOCK7Q96N67 2140 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 TRAV34A0A0B4J273 112 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 A0A0B4J293 547 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 GLOD5A6NK44 160 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 LIPT2A6NK58 231 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 ERVV-2B6SEH9 535 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 ZNF587BE7ETH6 402 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 UBXN8O00124 270 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 BMPR1BO00238 502 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 GRID2O43424 1007 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 KLHL41O60662 606 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 ENTPD3O75355 529 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 SEC14L2O76054 403 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 SEC31AO94979 1220 aaKnown RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 FTCDO95954 541 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 IL4RP24394 825 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 PTAFRP25105 342 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 MCM3P25205 808 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 BDKRB2P30411 391 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 TMPOP42166 694 aaKnown RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 PIP4K2AP48426 406 aaPredicted RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 IFNAR2P48551 515 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 SULT1E1P49888 294 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 LIG4P49917 911 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 SLC12A3P55017 1021 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 HNRNPH2P55795 449 aaKnown RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 RELQ04864 619 aaPredicted RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 TEFQ10587 303 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 INAQ16352 499 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 GSTA3Q16772 222 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 KRT24Q2M2I5 525 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 COL28A1Q2UY09 1125 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 KBTBD12Q3ZCT8 623 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 RAB41Q5JT25 222 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 C6orf141Q5SZD1 244 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 PLEKHA7Q6IQ23 1121 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 SARM1Q6SZW1 724 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 CCBE1Q6UXH8 406 aaPredicted RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 RGS9BPQ6ZS82 235 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 FOXL2NBQ6ZUU3 175 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 USP43Q70EL4 1123 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 ZNF771Q7L3S4 317 aaPredicted RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 CHERPQ8IWX8 916 aaKnown RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 MUC20Q8N307 709 aaPredicted RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 SPATA6LQ8N4H0 392 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 LMNTD1Q8N9Z9 388 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 POC5Q8NA72 575 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 KBTBD3Q8NAB2 608 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 CCDC110Q8TBZ0 833 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 CD101Q93033 1021 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 CMTM3Q96MX0 182 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 GCNAQ96QF7 691 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 NR1H4Q96RI1 486 aaPredicted RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 PAIP2Q9BPZ3 127 aaKnown RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 KLHL4Q9C0H6 718 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 USP44Q9H0E7 712 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 LRRC4Q9HBW1 653 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 IL1RAPL2Q9NP60 686 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 MMP25Q9NPA2 562 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 POLE3Q9NRF9 147 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 ANO10Q9NW15 660 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 AIPL1Q9NZN9 384 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 C5AR2Q9P296 337 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 IL19Q9UHD0 177 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 LIPT1Q9Y234 373 aa3.68□□□□□ -1.82
VPS50-209ENST00000467326 CAB39Q9Y376 341 aaPredicted RBP3.68□□□□□ -1.82
VPS50-209ENST00000467326 RGSL1A5PLK6 1076 aa3.67□□□□□ -1.82
VPS50-209ENST00000467326 NPIPB15A6NHN6 443 aaPredicted RBP3.67□□□□□ -1.82
VPS50-209ENST00000467326 AP3B1O00203 1094 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms