RNA–Protein interactions for RNA: ENST00000466969.1

UBR4-210, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-210ENST00000466969 RBBP7Q16576 425 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 RHBDD2Q6NTF9 364 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 CRTC3Q6UUV7 619 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 WASH2PQ6VEQ5 465 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 CAPN12Q6ZSI9 719 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 C11orf96Q7Z7L8 435 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 TMEM151BQ8IW70 566 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 KBTBD2Q8IY47 623 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 GRAMD1CQ8IYS0 662 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 SPRTNQ9H040 489 aaPredicted RBP12.18□□□□□ -0.46
UBR4-210ENST00000466969 DMRT3Q9NQL9 472 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 TXLNGQ9NUQ3 528 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 ATXN10Q9UBB4 475 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 SLC23A2Q9UGH3 650 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 NOCTQ9UK39 431 aaKnown RBP12.18□□□□□ -0.46
UBR4-210ENST00000466969 AP1M2Q9Y6Q5 423 aa12.18□□□□□ -0.46
UBR4-210ENST00000466969 VEGFDO43915 354 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 PRAMEF11O60813 436 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 WDPCPO95876 746 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 EPHB2P29323 1055 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 SOX11P35716 441 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 GCNT1Q02742 428 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 KRTAP24-1Q3LI83 254 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 NKAIN1Q4KMZ8 207 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 LRRC66Q68CR7 880 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 CEP57L1Q8IYX8 460 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 VWA5B2Q8N398 1253 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 SIRT6Q8N6T7 355 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 OR11G2Q8NGC1 345 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 BRIX1Q8TDN6 353 aaKnown RBP12.17□□□□□ -0.46
UBR4-210ENST00000466969 SPATA32Q96LK8 384 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 PPM1MQ96MI6 270 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 CFAP57Q96MR6 1250 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 GDPD2Q9HCC8 539 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 ZNF160Q9HCG1 818 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 CNOT6Q9ULM6 557 aaKnown RBP12.17□□□□□ -0.46
UBR4-210ENST00000466969 CNTN6Q9UQ52 1028 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 SMC3Q9UQE7 1217 aa12.17□□□□□ -0.46
UBR4-210ENST00000466969 OR5H15A6NDH6 313 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 TRIM64BA6NI03 449 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 KMOO15229 486 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 TTI1O43156 1089 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 HPP00738 406 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 PVRP15151 417 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 ZNF7P17097 686 aaPredicted RBP12.16□□□□□ -0.46
UBR4-210ENST00000466969 CTPS1P17812 591 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 FDXRP22570 491 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 LMAN1P49257 510 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 DLX5P56178 289 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 HSF1Q00613 529 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 CETN1Q12798 172 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 PRKAA1Q13131 559 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 PTPRRQ15256 657 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 PTPN20Q4JDL3 420 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 ZNF766Q5HY98 468 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 FAM102AQ5T9C2 384 aaPredicted RBP12.16□□□□□ -0.46
UBR4-210ENST00000466969 ATG9BQ674R7 924 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 FAM173BQ6P4H8 233 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 CCDC71Q8IV32 467 aaPredicted RBP12.16□□□□□ -0.46
UBR4-210ENST00000466969 NDUFAF2Q8N183 169 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 MARVELD2Q8N4S9 558 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 GPR150Q8NGU9 434 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 MCCC1Q96RQ3 725 aaPredicted RBP12.16□□□□□ -0.46
UBR4-210ENST00000466969 PLA2G12AQ9BZM1 189 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 OR2AG1Q9H205 316 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 ACP6Q9NPH0 428 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 FAM207AQ9NSI2 230 aaPredicted RBP12.16□□□□□ -0.46
UBR4-210ENST00000466969 CRIM1Q9NZV1 1036 aa12.16□□□□□ -0.46
UBR4-210ENST00000466969 A0A0G2JK05 382 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 GSAPA4D1B5 854 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 OR6C74A6NCV1 312 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 GPR89AB7ZAQ6 455 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 OR2B3O76000 313 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 GPR89BP0CG08 455 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 CD53P19397 219 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 FLT3P36888 993 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 PEX19P40855 299 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 RENBPP51606 427 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 ATP11AP98196 1134 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 PTSQ03393 145 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 STK38Q15208 465 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 CATSPEREQ5SY80 951 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 HIBCHQ6NVY1 386 aaPredicted RBP12.15□□□□□ -0.46
UBR4-210ENST00000466969 BNIPLQ7Z465 357 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 LRRTM4Q86VH4 590 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 ARHGEF19Q8IW93 802 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 FAM20CQ8IXL6 584 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 NSMCE3Q96MG7 304 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 USP28Q96RU2 1077 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 TIMM29Q9BSF4 260 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 C19orf24Q9BVV8 132 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 SARGQ9BW04 601 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 AMBRA1Q9C0C7 1298 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 FANCLQ9NW38 375 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 DHCR7Q9UBM7 475 aaKnown RBP12.15□□□□□ -0.46
UBR4-210ENST00000466969 APEX2Q9UBZ4 518 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 MTMR6Q9Y217 621 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 ZNF281Q9Y2X9 895 aa12.15□□□□□ -0.46
UBR4-210ENST00000466969 ADGRG1Q9Y653 693 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms