RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MRPS18BQ9Y676 258 aaKnown RBP17.13■□□□□ 0.33
COL7A1-206ENST00000466591 PIPSLA2A3N6 862 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 OR6C74A6NCV1 312 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 OR5K3A6NET4 321 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 TLCD2A6NGC4 264 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 GOLGA6L6A8MZA4 724 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 SUV39H1O43463 412 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 GAS8O95995 478 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 FGF5P12034 268 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 NDUFS1P28331 727 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 OAS2P29728 719 aaKnown RBP17.12■□□□□ 0.33
COL7A1-206ENST00000466591 PTPN7P35236 360 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 VAV2P52735 878 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 KIF5AQ12840 1032 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 OLIG2Q13516 323 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 SPARCL1Q14515 664 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 KCNAB1Q14722 419 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
COL7A1-206ENST00000466591 DUS1LQ6P1R4 473 aaKnown RBP17.12■□□□□ 0.33
COL7A1-206ENST00000466591 HOOK3Q86VS8 718 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 TMEM126BQ8IUX1 230 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 KLHL6Q8WZ60 621 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 MAP3K3Q99759 626 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 CCM2Q9BSQ5 444 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 SLC7A5P2Q9GIP4 190 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 TWSG1Q9GZX9 223 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 DUSP10Q9Y6W6 482 aa17.12■□□□□ 0.33
COL7A1-206ENST00000466591 IGHV5-51A0A0C4DH38 117 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 GSAPA4D1B5 854 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 CDC14CA4D256 554 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 PRR19A6NJB7 356 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 EBLN1P0CF75 366 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 CDH3P22223 829 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 MC4RP32245 332 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 ARCN1P48444 511 aaKnown RBP17.11■□□□□ 0.33
COL7A1-206ENST00000466591 LMAN1P49257 510 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 PPP1CAP62136 330 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 HSD11B2P80365 405 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 BCL7AQ4VC05 210 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 ATP1A1-AS1Q5TC04 95 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 RANBP10Q6VN20 620 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 SNX20Q7Z614 316 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 BPHLQ86WA6 291 aaPredicted RBP17.11■□□□□ 0.33
COL7A1-206ENST00000466591 KMT5CQ86Y97 462 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 ACRBPQ8NEB7 543 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 OR13C4Q8NGS5 318 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 HM13Q8TCT9 377 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 NAT14Q8WUY8 206 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 FERD3LQ96RJ6 166 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 INSM2Q96T92 566 aaPredicted RBP17.11■□□□□ 0.33
COL7A1-206ENST00000466591 BAG1Q99933 345 aaPredicted RBP17.11■□□□□ 0.33
COL7A1-206ENST00000466591 SPRY4Q9C004 299 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 FGF21Q9NSA1 209 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 POLHQ9Y253 713 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 PIEZO2Q9H5I5 2752 aa17.11■□□□□ 0.33
COL7A1-206ENST00000466591 RCCD1A6NED2 376 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 MIF4GDA9UHW6 222 aaKnown RBP17.1■□□□□ 0.33
COL7A1-206ENST00000466591 MKRN2OSH3BPM6 223 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 ATP1B2P14415 290 aaPredicted RBP17.1■□□□□ 0.33
COL7A1-206ENST00000466591 RPS15P62841 145 aaKnown RBP17.1■□□□□ 0.33
COL7A1-206ENST00000466591 TLE1Q04724 770 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 DNASE1L3Q13609 305 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 P3H1Q32P28 736 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 LACTB2Q53H82 288 aaPredicted RBP17.1■□□□□ 0.33
COL7A1-206ENST00000466591 NXPE1Q8N323 547 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 FAM71DQ8N9W8 422 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 SPDYE1Q8NFV5 336 aaPredicted RBP17.1■□□□□ 0.33
COL7A1-206ENST00000466591 OR4E2Q8NGC2 313 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 ZFPM2Q8WW38 1151 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 LCN9Q8WX39 176 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 SEC14L1Q92503 715 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 SRMSQ9H3Y6 488 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 LRRC40Q9H9A6 602 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 LHX9Q9NQ69 397 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 SLC24A2Q9UI40 661 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 MAN2B2Q9Y2E5 1009 aa17.1■□□□□ 0.33
COL7A1-206ENST00000466591 ZNF106Q9H2Y7 1883 aaKnown RBP17.1■□□□□ 0.33
COL7A1-206ENST00000466591 BTNL10A8MVZ5 291 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 MATN2O00339 956 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 CCL22O00626 93 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 GAPDHSO14556 408 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 CPNE3O75131 537 aaKnown RBP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 SCRG1O75711 98 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 ZBTB11O95625 1053 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 NTRK1P04629 796 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 FOLR1P15328 257 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 POLR2CP19387 275 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 CA5AP35218 305 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 ADRA1AP35348 466 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 PARP6Q2NL67 630 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 GPR33Q49SQ1 333 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 PWWP2BQ6NUJ5 590 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 AADACL2Q6P093 401 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 TAB3Q8N5C8 712 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 N4BP2L2Q92802 583 aaPredicted RBP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 MR1Q95460 341 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.09■□□□□ 0.33
COL7A1-206ENST00000466591 KIR3DX1Q9H7L2 352 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 ZDHHC3Q9NYG2 299 aa17.09■□□□□ 0.33
COL7A1-206ENST00000466591 ANAPC2Q9UJX6 822 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms