RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 CYBRD1Q53TN4 286 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 CLVS1Q8IUQ0 354 aaPredicted RBP18.03■□□□□ 0.48
SYNE4-204ENST00000465425 LRRC43Q8N309 656 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 PDPRQ8NCN5 879 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 ZBTB18Q99592 522 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 ASB8Q9H765 288 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 LIN28AQ9H9Z2 209 aaKnown RBP18.03■□□□□ 0.48
SYNE4-204ENST00000465425 AFF4Q9UHB7 1163 aaKnown RBP18.03■□□□□ 0.48
SYNE4-204ENST00000465425 VPS51Q9UID3 782 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 ST14Q9Y5Y6 855 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 KCNH1O95259 989 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 TRIM16O95361 564 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 MBL2P11226 248 aaPredicted RBP18.03■□□□□ 0.48
SYNE4-204ENST00000465425 CDK4P11802 303 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 SLC2A4P14672 509 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 JAK1P23458 1154 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 VARSP26640 1264 aaKnown RBP18.03■□□□□ 0.48
SYNE4-204ENST00000465425 RPL38P63173 70 aaKnown RBP18.03■□□□□ 0.48
SYNE4-204ENST00000465425 TRAF3Q13114 568 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 PWP1Q13610 501 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 GPNMBQ14956 572 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 ZBED5Q49AG3 693 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 OTUD3Q5T2D3 398 aaPredicted RBP18.03■□□□□ 0.48
SYNE4-204ENST00000465425 CHCHD4Q8N4Q1 142 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 OR6K2Q8NGY2 324 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 ITFG1Q8TB96 612 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 BHMTQ93088 406 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 BOCQ9BWV1 1114 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 SEZ6LQ9BYH1 1024 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 ACTL8Q9H568 366 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 ZFYVE1Q9HBF4 777 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 PKD2L2Q9NZM6 624 aa18.03■□□□□ 0.48
SYNE4-204ENST00000465425 C1orf232A0A0U1RR37 186 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 TRIM64CA6NLI5 447 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 RGS14O43566 566 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 DEAF1O75398 565 aaPredicted RBP18.02■□□□□ 0.48
SYNE4-204ENST00000465425 PGLSO95336 258 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 SNAP29O95721 258 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 MSH3P20585 1137 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 ITGALP20701 1170 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 DGKAP23743 735 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 NFKBIAP25963 317 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 AP1S1P61966 158 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 SMAD3P84022 425 aaKnown RBP18.02■□□□□ 0.48
SYNE4-204ENST00000465425 FAM98BQ52LJ0 330 aaKnown RBP18.02■□□□□ 0.48
SYNE4-204ENST00000465425 DTWD1Q8N5C7 304 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 B4GALNT2Q8NHY0 566 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 ADAMTS16Q8TE57 1224 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 C17orf80Q9BSJ5 609 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 WWOXQ9NZC7 414 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 SRRDQ9UH36 339 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 EIF3LQ9Y262 564 aaKnown RBP18.02■□□□□ 0.48
SYNE4-204ENST00000465425 OARD1Q9Y530 152 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 BACE2Q9Y5Z0 518 aa18.02■□□□□ 0.48
SYNE4-204ENST00000465425 SLC25A14O95258 325 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 GLUD1P00367 558 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 ALBP02768 609 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 ANXA6P08133 673 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 CSKP41240 450 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 MAD2L1Q13257 205 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 NFATC2Q13469 925 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 SELPLGQ14242 412 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 VEPH1Q14D04 833 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 SNX20Q7Z614 316 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 AADATQ8N5Z0 425 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 CLDN19Q8N6F1 224 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 LEMD2Q8NC56 503 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 ZNF461Q8TAF7 563 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 RAET1EQ8TD07 263 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 BPIFB1Q8TDL5 484 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 CCDC97Q96F63 343 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 OPTCQ9UBM4 332 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 ZNF639Q9UID6 485 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 CROCCQ5TZA2 2017 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 FFAR3O14843 346 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 GPR42O15529 346 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 RAP2AP10114 183 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 RPS3P23396 243 aaKnown RBP eCLIP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 AKT1P31749 480 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 HPCAP84074 193 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 CHRNB3Q05901 458 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 DCTN2Q13561 401 aaKnown RBP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 PYCR3Q53H96 274 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 TMEM214Q6NUQ4 689 aaKnown RBP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 HJURPQ8NCD3 748 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 OR8J3Q8NGG0 315 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 SLC13A3Q8WWT9 602 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 EZH1Q92800 747 aaPredicted RBP18.01■□□□□ 0.47
SYNE4-204ENST00000465425 ISOC1Q96CN7 298 aa18.01■□□□□ 0.47
SYNE4-204ENST00000465425 TRIM64A6NGJ6 449 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 ANKRD28O15084 1053 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 RSL1D1O76021 490 aaKnown RBP18■□□□□ 0.47
SYNE4-204ENST00000465425 BCL2L1Q07817 233 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 AAK1Q2M2I8 961 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 NUDT8Q8WV74 236 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 PIH1D2Q8WWB5 315 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 SOX17Q9H6I2 414 aaPredicted RBP18■□□□□ 0.47
SYNE4-204ENST00000465425 HSFX1Q9UBD0 423 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 STOML2Q9UJZ1 356 aa18■□□□□ 0.47
SYNE4-204ENST00000465425 PHF24Q9UPV7 400 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms