RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 SPDYE1Q8NFV5 336 aaPredicted RBP18.55■□□□□ 0.56
LMNB1-204ENST00000463908 MAPK15Q8TD08 544 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 INSM2Q96T92 566 aaPredicted RBP18.55■□□□□ 0.56
LMNB1-204ENST00000463908 WWP1Q9H0M0 922 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 OR52A5Q9H2C5 316 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 PPANQ9NQ55 473 aaKnown RBP18.55■□□□□ 0.56
LMNB1-204ENST00000463908 NFU1Q9UMS0 254 aa18.55■□□□□ 0.56
LMNB1-204ENST00000463908 ARHGEF17Q96PE2 2063 aaPredicted RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 KIR2DS5A0A0G2JLQ3 304 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 A0A0G2JNG1 304 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 KIR2DS3K7RE56 304 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 PFDN6O15212 129 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 B4GAT1O43505 415 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 NUDT21O43809 227 aaKnown RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 PIAS1O75925 651 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 PKMP14618 531 aaKnown RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 AOAHP28039 575 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 FASLGP48023 281 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 PREPP48147 710 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 UBE2IP63279 158 aaKnown RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 MGAT5Q09328 741 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 ILKQ13418 452 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 CUL1Q13616 776 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 KIR2DS5Q14953 304 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 BRD3Q15059 726 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 RPE65Q16518 533 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 CCDC157Q569K6 752 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 TEX35Q5T0J7 233 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 UBAP2Q5T6F2 1119 aaKnown RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 ZNF438Q7Z4V0 828 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 RELL1Q8IUW5 271 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 SPNS2Q8IVW8 549 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 OR6C4Q8NGE1 309 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 ELMO1Q92556 727 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 CCDC74AQ96AQ1 378 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 VPS37BQ9H9H4 285 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 SARS2Q9NP81 518 aaKnown RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 CPNE7Q9UBL6 633 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 MTRF1LQ9UGC7 380 aaKnown RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 GNPTGQ9UJJ9 305 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 CDYLQ9Y232 598 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 APOBEC2Q9Y235 224 aaKnown RBP18.54■□□□□ 0.56
LMNB1-204ENST00000463908 VPS9D1Q9Y2B5 631 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 MED16Q9Y2X0 877 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 PCDHB1Q9Y5F3 818 aa18.54■□□□□ 0.56
LMNB1-204ENST00000463908 TCRBV9S1A1TA0A576 114 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 CXorf49A8MYA2 514 aaPredicted RBP18.53■□□□□ 0.56
LMNB1-204ENST00000463908 LIN7AO14910 233 aaPredicted RBP18.53■□□□□ 0.56
LMNB1-204ENST00000463908 NIPSNAP2O75323 286 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 GPC4O75487 556 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 RFPL3O75679 317 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 ESR1P03372 595 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 GP1BAP07359 652 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 PNLIPP16233 465 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 NR1D2Q14995 579 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 KYNUQ16719 465 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 KIAA0408Q6ZU52 694 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 NAT6Q93015 286 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 RMDN2Q96LZ7 410 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 CCDC3Q9BQI4 270 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 EVA1BQ9NVM1 165 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 PSAT1Q9Y617 370 aa18.53■□□□□ 0.56
LMNB1-204ENST00000463908 ZFC3H1O60293 1989 aaKnown RBP18.53■□□□□ 0.56
LMNB1-204ENST00000463908 SLU7O95391 586 aaKnown RBP18.52■□□□□ 0.56
LMNB1-204ENST00000463908 GSTA2P09210 222 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 SLC2A4P14672 509 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 ABCG1P45844 678 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 TIAL1Q01085 375 aaKnown RBP eCLIP18.52■□□□□ 0.56
LMNB1-204ENST00000463908 RPA4Q13156 261 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 DHRS13Q6UX07 377 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 GALNT7Q86SF2 657 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 SLC9B2Q86UD5 537 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 ZNF761Q86XN6 746 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-204ENST00000463908 VRK3Q8IV63 474 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 Q8N9G6 341 aaPredicted RBP18.52■□□□□ 0.56
LMNB1-204ENST00000463908 ADAMTS14Q8WXS8 1223 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 FMO2Q99518 471 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 ANKZF1Q9H8Y5 726 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 SLC40A1Q9NP59 571 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 LATS2Q9NRM7 1088 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 NINJ2Q9NZG7 142 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 CFAP20Q9Y6A4 193 aaKnown RBP18.52■□□□□ 0.56
LMNB1-204ENST00000463908 CHD6Q8TD26 2715 aa18.52■□□□□ 0.56
LMNB1-204ENST00000463908 A0A1W2PQM1 296 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 RHPN2P1A8MT19 583 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 F8W8V4 182 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 OPA1O60313 960 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 CHRM3P20309 590 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 ACADLP28330 430 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 HALP42357 657 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 CSE1LP55060 971 aaKnown RBP18.51■□□□□ 0.55
LMNB1-204ENST00000463908 CLDN6P56747 220 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 OR1D5P58170 312 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 CCL7P80098 99 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 E2F1Q01094 437 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 INSM1Q01101 510 aaPredicted RBP18.51■□□□□ 0.55
LMNB1-204ENST00000463908 HHEXQ03014 270 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 HSPA14Q0VDF9 509 aa18.51■□□□□ 0.55
LMNB1-204ENST00000463908 BOP1Q14137 746 aaKnown RBP18.51■□□□□ 0.55
LMNB1-204ENST00000463908 RAB44Q7Z6P3 723 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms