RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 CDRT15L2A8MXV6 281 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 UBXN7O94888 489 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 C9P02748 559 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 MPOP05164 745 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 OGNP20774 298 aaKnown RBP12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 NMBRP28336 390 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 PCBP4P57723 403 aaKnown RBP12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 DR1Q01658 176 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 DNAJC21Q5F1R6 531 aaKnown RBP12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 XKR5Q6UX68 686 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 ZNF574Q6ZN55 896 aaPredicted RBP12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 USP53Q70EK8 1073 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 TMPRSS9Q7Z410 1059 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 SDCCAG8Q86SQ7 713 aaPredicted RBP12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 LMNTD2Q8IXW0 634 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 CFAP206Q8IYR0 622 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 AGBL5Q8NDL9 886 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 RMDN2Q96LZ7 410 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 FOXP3Q9BZS1 431 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 AKAP13Q12802 2813 aa12.78□□□□□ -0.36
R3HDM1-213ENST00000463230 IGF2RP11717 2491 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 A0A087WV48 116 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 A0A1W2PNU3 283 aaPredicted RBP12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 OR52A4PA6NMU1 304 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 SRRM3A6NNA2 597 aaPredicted RBP12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 TAF4O00268 1085 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 IFRD1O00458 451 aaPredicted RBP12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 PRMT5O14744 637 aaPredicted RBP12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 PRSS56P0CW18 603 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 CRADDP78560 199 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 CFHR1Q03591 330 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 GPR18Q14330 331 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 NKAIN2Q5VXU1 208 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 C12orf66Q96MD2 445 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 NAT9Q9BTE0 207 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 OR52A5Q9H2C5 316 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 MVB12BQ9H7P6 319 aa12.77□□□□□ -0.36
R3HDM1-213ENST00000463230 B4E171 279 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 H3BMM5 538 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 KPNA5O15131 536 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 TUBB4AP04350 444 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 JMJD7P0C870 316 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 AMD1P17707 334 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 CD82P27701 267 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 TSPAN7P41732 249 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 CAPZBP47756 277 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 ADARP55265 1226 aaKnown RBP12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 MORF4L2Q15014 288 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 TYSND1Q2T9J0 566 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 TMEM135Q86UB9 458 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 PDZD3Q86UT5 571 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 CARFQ8N187 725 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 CLDN19Q8N6F1 224 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 INSM2Q96T92 566 aaPredicted RBP12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 TBC1D10AQ9BXI6 508 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 KIR3DX1Q9H7L2 352 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 RDH14Q9HBH5 336 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 GNPTGQ9UJJ9 305 aa12.77□□□□□ -0.37
R3HDM1-213ENST00000463230 CASC3O15234 703 aaKnown RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 NVLO15381 856 aaKnown RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 RRP8O43159 456 aaKnown RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 USP1O94782 785 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 TNFSF15O95150 251 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 HOXB3P14651 431 aaPredicted RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 ARNTP27540 789 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 CSTF2P33240 577 aaKnown RBP eCLIP12.76□□□□□ -0.372e-13■■■■■ 37.5
R3HDM1-213ENST00000463230 ANKRD20A4Q4UJ75 823 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 CASC4Q6P4E1 433 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 PRSS42Q7Z5A4 293 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 ARHGAP22Q7Z5H3 698 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 ZNF761Q86XN6 746 aaPredicted RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 JAMLQ86YT9 394 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 ZNF248Q8NDW4 579 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 GABPB2Q8TAK5 448 aaPredicted RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 NCSTNQ92542 709 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 MFSD3Q96ES6 412 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 ZDHHC12Q96GR4 267 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 PANX3Q96QZ0 392 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 CD180Q99467 661 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 IMP3Q9NV31 184 aaKnown RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 OGFRQ9NZT2 677 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 PSMD13Q9UNM6 376 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 PCDHGA3Q9Y5H0 932 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 SLC5A10A0PJK1 596 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 FAM187AA6NFU0 413 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 FANCGO15287 622 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 NDUFS3O75489 264 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 VAPBO95292 243 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 TTC4O95801 387 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 POLBP06746 335 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 IVDP26440 423 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 EIF2S3P41091 472 aaKnown RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 MAPK9P45984 424 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 ARCN1P48444 511 aaKnown RBP12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 SEMA3AQ14563 771 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 C16orf72Q14CZ0 275 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 TMED2Q15363 201 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 KIF26BQ2KJY2 2108 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 SYTL3Q4VX76 610 aa12.76□□□□□ -0.37
R3HDM1-213ENST00000463230 IZUMO3Q5VZ72 239 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms