RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 NRDCO43847 1150 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 KIF1CO43896 1103 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 SNX2O60749 519 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ZNF189O75820 626 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ANXA9O76027 345 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 KIAA0754O94854 1291 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 SLC2A4P14672 509 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 BRAFP15056 766 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 XRCC1P18887 633 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 CXCR5P32302 372 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 HMGCLP35914 325 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 DLSTP36957 453 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 CAPZBP47756 277 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 LEPRP48357 1165 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PPM1FP49593 454 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ZNF140P52738 457 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 MLLT10P55197 1068 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PPP1CAP62136 330 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 LAMB3Q13751 1172 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 SPARCL1Q14515 664 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PTPRCAPQ14761 206 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 P3H1Q32P28 736 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PLA2G4EQ3MJ16 856 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ZNF569Q5MCW4 686 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 HIST2H2BCQ6DN03 193 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 TCTN3Q6NUS6 607 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 TMEM26Q6ZUK4 368 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 GLT6D1Q7Z4J2 308 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PRSS42Q7Z5A4 293 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PLXDC1Q8IUK5 500 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PHYKPLQ8IUZ5 450 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ZNF547Q8IVP9 402 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 TRAM1L1Q8N609 369 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 BLOC1S5Q8TDH9 187 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 RSC1A1Q92681 617 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 SH3KBP1Q96B97 665 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 TGM7Q96PF1 710 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 TBL1YQ9BQ87 522 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ZSCAN5AQ9BUG6 496 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 SPATA16Q9BXB7 569 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 FSD1LQ9BXM9 530 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 FRMD8P1Q9BZ68 369 aaPredicted RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 OR2AG1Q9H205 316 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 TRABDQ9H4I3 376 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 STN1Q9H668 368 aaKnown RBP7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ARNT2Q9HBZ2 717 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 BPIFA1Q9NP55 256 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 HACD3Q9P035 362 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 SLC23A2Q9UGH3 650 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PYCARDQ9ULZ3 195 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 PCDHGA6Q9Y5G7 932 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 ARL5AQ9Y689 179 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 POLEQ07864 2286 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 OTOGQ6ZRI0 2925 aa7.77□□□□□ -1.17
CDC42BPA-210ENST00000462553 TACC2O95359 2948 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 DCHS2Q6V1P9 2916 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 OR5K4A6NMS3 321 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 TOX3O15405 576 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 RFPL1O75677 317 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 DNAJB5O75953 348 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 STK10O94804 968 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 UBXN7O94888 489 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 TIAF1O95411 115 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 AP2A1O95782 977 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 FGGP02679 453 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 RNF224P0DH78 156 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 FGF5P12034 268 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 ETS1P14921 441 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 TYRP1P17643 537 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 SLC19A1P41440 591 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 SEPHS1P49903 392 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 PMS2P54278 862 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 XIAPP98170 497 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 FOXM1Q08050 763 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 SNX1Q13596 522 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 ERV3-1Q14264 604 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 KCTD19Q17RG1 926 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 PARP6Q2NL67 630 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 ATP13A5Q4VNC0 1218 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 PDPK2PQ6A1A2 396 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 DRICH1Q6PGQ1 229 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 CRTC3Q6UUV7 619 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 C6orf15Q6UXA7 325 aaPredicted RBP7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 ARHGEF18Q6ZSZ5 1173 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 C11orf96Q7Z7L8 435 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 ADGRG6Q86SQ4 1221 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 SLC35F6Q8N357 371 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 RASGEF1CQ8N431 466 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 PRELID2Q8N945 189 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 AVL9Q8NBF6 648 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 KLHL6Q8WZ60 621 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 GLYATL1Q969I3 302 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 VPS35Q96QK1 796 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 OR6C1Q96RD1 312 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 SRPK1Q96SB4 655 aaKnown RBP7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 RUFY1Q96T51 708 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 FERMT1Q9BQL6 677 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 TIMM29Q9BSF4 260 aa7.76□□□□□ -1.17
CDC42BPA-210ENST00000462553 TRIM55Q9BYV6 548 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms