RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 AGBL5Q8NDL9 886 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 GPR150Q8NGU9 434 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 ELMO1Q92556 727 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 SLC46A1Q96NT5 459 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 PANX3Q96QZ0 392 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 INSM2Q96T92 566 aaPredicted RBP15.8■□□□□ 0.12
CD28-203ENST00000458610 CARD6Q9BX69 1037 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 SEMA6CQ9H3T2 930 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 PDP2Q9P2J9 529 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 LOXL2Q9Y4K0 774 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 RPS6KL1Q9Y6S9 549 aa15.8■□□□□ 0.12
CD28-203ENST00000458610 TPRP12270 2363 aaKnown RBP15.8■□□□□ 0.12
CD28-203ENST00000458610 ZNF106Q9H2Y7 1883 aaKnown RBP15.8■□□□□ 0.12
CD28-203ENST00000458610 H3BMM5 538 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 CASC3O15234 703 aaKnown RBP15.79■□□□□ 0.12
CD28-203ENST00000458610 RRP8O43159 456 aaKnown RBP15.79■□□□□ 0.12
CD28-203ENST00000458610 USP1O94782 785 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 TNFSF15O95150 251 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 ITGA2BP08514 1039 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 MAGEA3P43357 314 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 GPR18Q14330 331 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 PLCL1Q15111 1095 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 TBC1D25Q3MII6 688 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 ANKRD20A4Q4UJ75 823 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 SYTL3Q4VX76 610 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 TMEM164Q5U3C3 297 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 PTRHD1Q6GMV3 140 aaKnown RBP15.79■□□□□ 0.12
CD28-203ENST00000458610 NEPROQ6NW34 567 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 ZNF574Q6ZN55 896 aaPredicted RBP15.79■□□□□ 0.12
CD28-203ENST00000458610 TMEM135Q86UB9 458 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 PDIK1LQ8N165 341 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 SPATA4Q8NEY3 305 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 CALML6Q8TD86 181 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 ASZ1Q8WWH4 475 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 CCDC97Q96F63 343 aaPredicted RBP15.79■□□□□ 0.12
CD28-203ENST00000458610 STAMBPL1Q96FJ0 436 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 ZDHHC12Q96GR4 267 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 CCDC74BQ96LY2 380 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 KRT12Q99456 494 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 TBC1D10AQ9BXI6 508 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 B3GNT4Q9C0J1 378 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 MVB12BQ9H7P6 319 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 GNPTGQ9UJJ9 305 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 PRSS21Q9Y6M0 314 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 ACACBO00763 2458 aa15.79■□□□□ 0.12
CD28-203ENST00000458610 FAM187AA6NFU0 413 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 KIF2AO00139 706 aaPredicted RBP15.78■□□□□ 0.12
CD28-203ENST00000458610 TOX3O15405 576 aaPredicted RBP15.78■□□□□ 0.12
CD28-203ENST00000458610 TTI1O43156 1089 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 KDM1AO60341 852 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 OR1I1O60431 355 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 TTC4O95801 387 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 APOA4P06727 396 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 THRAP10827 490 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 HOXB3P14651 431 aaPredicted RBP15.78■□□□□ 0.12
CD28-203ENST00000458610 OGNP20774 298 aaKnown RBP15.78■□□□□ 0.12
CD28-203ENST00000458610 RPS3P23396 243 aaKnown RBP eCLIP15.78■□□□□ 0.12
CD28-203ENST00000458610 CKAP4Q07065 602 aaKnown RBP15.78■□□□□ 0.12
CD28-203ENST00000458610 TMED2Q15363 201 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 KCTD19Q17RG1 926 aaPredicted RBP15.78■□□□□ 0.12
CD28-203ENST00000458610 ARMC6Q6NXE6 501 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 CES3Q6UWW8 571 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 LRRC69Q6ZNQ3 347 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 GSDMBQ8TAX9 411 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 NAT14Q8WUY8 206 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 ZNF669Q96BR6 464 aaPredicted RBP15.78■□□□□ 0.12
CD28-203ENST00000458610 SNF8Q96H20 258 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 SIGLEC10Q96LC7 697 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 FERD3LQ96RJ6 166 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 RAB33BQ9H082 229 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 OR52A5Q9H2C5 316 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 EPHA6Q9UF33 1036 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 UNC13CQ8NB66 2214 aa15.78■□□□□ 0.12
CD28-203ENST00000458610 ZFC3H1O60293 1989 aaKnown RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 EFCAB8A8MWE9 144 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 FANCGO15287 622 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 TYRP1P17643 537 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 PGAM1P18669 254 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 IVDP26440 423 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 CSF2RBP32927 897 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 ARCN1P48444 511 aaKnown RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 PCBP4P57723 403 aaKnown RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 CFHR1Q03591 330 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 BOP1Q14137 746 aaKnown RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 SEMA3AQ14563 771 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 LONRF1Q17RB8 773 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 TMPRSS9Q7Z410 1059 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 LDB1Q86U70 411 aaPredicted RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 ACVR1CQ8NER5 493 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 SPDYE1Q8NFV5 336 aaPredicted RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 SNIP1Q8TAD8 396 aaKnown RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 TFGQ92734 400 aaPredicted RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 LRRC39Q96DD0 335 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 RMDN2Q96LZ7 410 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 KIR3DX1Q9H7L2 352 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 INTS10Q9NVR2 710 aaKnown RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 MARCH4Q9P2E8 410 aaPredicted RBP15.77■□□□□ 0.12
CD28-203ENST00000458610 PISDQ9UG56 409 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 SLC24A2Q9UI40 661 aa15.77■□□□□ 0.12
CD28-203ENST00000458610 PCDHGA7Q9Y5G6 932 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms