RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 SEPHS1P49903 392 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 MC2RQ01718 297 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 CALCOCO2Q13137 446 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 KHDC1Q4VXA5 237 aaKnown RBP21.23■□□□□ 0.99
C9orf3-208ENST00000451893 IRGCQ6NXR0 463 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 TMEM220Q6QAJ8 160 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 ARHGAP22Q7Z5H3 698 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 MTERF4Q7Z6M4 381 aaKnown RBP21.23■□□□□ 0.99
C9orf3-208ENST00000451893 NLGN4XQ8N0W4 816 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 NLGN4YQ8NFZ3 816 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-208ENST00000451893 AENQ8WTP8 325 aaKnown RBP21.23■□□□□ 0.99
C9orf3-208ENST00000451893 CAVIN3Q969G5 261 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 DCUN1D1Q96GG9 259 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 FAM118BQ9BPY3 351 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 TRIM51Q9BSJ1 452 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 EFHD1Q9BUP0 239 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 SEMA4CQ9C0C4 833 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 GPN2Q9H9Y4 310 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A7Q9HAW7 530 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A10Q9HAW8 530 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 UGT1A8Q9HAW9 530 aa21.23■□□□□ 0.99
C9orf3-208ENST00000451893 CAPN5O15484 640 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-208ENST00000451893 PRAMEF1O95521 474 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 CRTAMO95727 393 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 RALBP11234 206 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 SFTPCP11686 197 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 PSMB4P28070 264 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 GFERP55789 205 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 PDE1BQ01064 536 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ANKRD20A2Q5SQ80 823 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 GPRC6AQ5T6X5 926 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ANKRD20A1Q5TYW2 823 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 AGAP9Q5VTM2 703 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ANKRD20A3Q5VUR7 823 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ABRAXAS1Q6UWZ7 409 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 XKR5Q6UX68 686 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 DET1Q7L5Y6 550 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ZNF547Q8IVP9 402 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ZNF398Q8TD17 642 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 RTP4Q96DX8 246 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ZDHHC12Q96GR4 267 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 SNF8Q96H20 258 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 C9orf72Q96LT7 481 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 APOL2Q9BQE5 337 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 FBXO8Q9NRD0 319 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ZNF624Q9P2J8 865 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-208ENST00000451893 FAM8A1Q9UBU6 413 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ASIC3Q9UHC3 531 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 CRLS1Q9UJA2 301 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 ARL5AQ9Y689 179 aa21.22■□□□□ 0.99
C9orf3-208ENST00000451893 SMG1Q96Q15 3661 aaKnown RBP21.22■□□□□ 0.99
C9orf3-208ENST00000451893 MN1Q10571 1320 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-208ENST00000451893 SMAPO00193 183 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 GPR39O43194 453 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 POP7O75817 140 aaKnown RBP21.21■□□□□ 0.99
C9orf3-208ENST00000451893 PLA2G2AP14555 144 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 LIFP15018 202 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 MAP4P27816 1152 aaKnown RBP21.21■□□□□ 0.99
C9orf3-208ENST00000451893 CYP4F2P78329 520 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 NFATC3Q12968 1075 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 GPR18Q14330 331 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 TAF1AQ15573 450 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-208ENST00000451893 FNBP1LQ5T0N5 605 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 CYB5D1Q6P9G0 228 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 KLHL35Q6PF15 583 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 WASH2PQ6VEQ5 465 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 ARHGEF18Q6ZSZ5 1173 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 CEP128Q6ZU80 1094 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 PRICKLE2Q7Z3G6 844 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 PCGF5Q86SE9 256 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 RASGRP3Q8IV61 690 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 DDHD1Q8NEL9 900 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 DTX3LQ8TDB6 740 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 ZNF514Q96K75 400 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-208ENST00000451893 TRIT1Q9H3H1 467 aaKnown RBP21.21■□□□□ 0.99
C9orf3-208ENST00000451893 ASB8Q9H765 288 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 WASH6PQ9NQA3 447 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 MTRF1LQ9UGC7 380 aaKnown RBP21.21■□□□□ 0.99
C9orf3-208ENST00000451893 NFU1Q9UMS0 254 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 PSMD13Q9UNM6 376 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 SNX24Q9Y343 169 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 COL6A6A6NMZ7 2263 aa21.21■□□□□ 0.99
C9orf3-208ENST00000451893 ZNF106Q9H2Y7 1883 aaKnown RBP21.2■□□□□ 0.98
C9orf3-208ENST00000451893 ESYT3A0FGR9 886 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 C5orf60A6NFR6 353 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 ZNF891A8MT65 544 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-208ENST00000451893 B8ZZF3 427 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 STK17BO94768 372 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 ANKRD34CP0C6C1 535 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 ARL4DP49703 201 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 KRT33BQ14525 404 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 CACHD1Q5VU97 1274 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 HDXQ7Z353 690 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 BMPERQ8N8U9 685 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 RASGEF1AQ8N9B8 481 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 OR4K2Q8NGD2 314 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 CCDC110Q8TBZ0 833 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 TMEM121Q9BTD3 319 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 DPH5Q9H2P9 285 aa21.2■□□□□ 0.98
C9orf3-208ENST00000451893 APMAPQ9HDC9 416 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms