RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 COQ5Q5HYK3 327 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 CLEC6AQ6EIG7 209 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 PRR5LQ6MZQ0 368 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 RPS27LQ71UM5 84 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 CCDC190Q86UF4 302 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FAM160B2Q86V87 743 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 ABI1Q8IZP0 508 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 GMCL1P1Q8NEA9 526 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 OR52K1Q8NGK4 314 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 PYCR2Q96C36 320 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 CDCA5Q96FF9 252 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 GPR78Q96P69 363 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 ITPAQ9BY32 194 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 UGT2B28Q9BY64 529 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 CYP4F12Q9HCS2 524 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 NGRNQ9NPE2 291 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 ANKEF1Q9NU02 776 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 COMMD8Q9NX08 183 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 PRR12Q9ULL5 1215 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 SMCHD1A6NHR9 2005 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 OR5K4A6NMS3 321 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 STX7O15400 261 aaKnown RBP8.5□□□□□ -1.05
LSM5-208ENST00000450169 SLC16A6O15403 523 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 PLA2G6O60733 806 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SUPT7LO94864 414 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 DNTTP04053 509 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 CYP11A1P05108 521 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 NPR3P17342 541 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 DDCP20711 480 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 HTR1EP28566 365 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SDC4P31431 198 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MAGEA11P43364 429 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 CHRNB3Q05901 458 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 DBPQ10586 325 aaPredicted RBP8.5□□□□□ -1.05
LSM5-208ENST00000450169 OLIG2Q13516 323 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 ZNF267Q14586 743 aaPredicted RBP8.5□□□□□ -1.05
LSM5-208ENST00000450169 PON2Q15165 354 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SYT16Q17RD7 645 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 ANKRD34AQ69YU3 496 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 PM20D1Q6GTS8 502 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SPESP1Q6UW49 350 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 ARSKQ6UWY0 536 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SIAH1Q8IUQ4 282 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SLC41A1Q8IVJ1 513 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SVOPLQ8N434 492 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 ZNF540Q8NDQ6 660 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 KBTBD8Q8NFY9 601 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 ITFG1Q8TB96 612 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MSANTD3Q96H12 275 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 C3orf30Q96M34 536 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 TMEM74Q96NL1 305 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 TBCBQ99426 244 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 LGMNQ99538 433 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 RHNO1Q9BSD3 238 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 HDHD5Q9BXW7 423 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 HAPLN2Q9GZV7 340 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MMP28Q9H239 520 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 RHOJQ9H4E5 214 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 PIF1Q9H611 641 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 NIPAL2Q9H841 368 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 CCNB1IP1Q9NPC3 277 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MAGEL2Q9UJ55 1249 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.5□□□□□ -1.05
LSM5-208ENST00000450169 RNF6Q9Y252 685 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 A0A1W2PRU2 124 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 LINC00862A6NCI5 91 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 ZNF487B1APH4 448 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MDM4O15151 490 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 GRAP2O75791 330 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 PSAPP07602 524 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 ATF6P18850 670 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 GADD45AP24522 165 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 CCNCP24863 283 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 DNAJA1P31689 397 aaKnown RBP8.5□□□□□ -1.05
LSM5-208ENST00000450169 LIPAP38571 399 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 CTSKP43235 329 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 RAB10P61026 200 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 GALEQ14376 348 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 FAM219BQ5XKK7 198 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 JADE1Q6IE81 842 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 LINC00518Q8N0U6 118 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 YIPF7Q8N8F6 280 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 SETD9Q8NE22 299 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 BLOC1S5Q8TDH9 187 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 UBASH3BQ8TF42 649 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 NCLNQ969V3 563 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MARC2Q969Z3 335 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 NECTIN4Q96NY8 510 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 TRNT1Q96Q11 434 aaKnown RBP8.5□□□□□ -1.05
LSM5-208ENST00000450169 SLC30A2Q9BRI3 323 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MSTO1Q9BUK6 570 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 CCSER2Q9H7U1 834 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 AKTIPQ9H8T0 292 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 FARSBQ9NSD9 589 aaKnown RBP8.5□□□□□ -1.05
LSM5-208ENST00000450169 GGA3Q9NZ52 723 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 BFARQ9NZS9 450 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 DNAJB9Q9UBS3 223 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 INVSQ9Y283 1065 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 TRAPPC4Q9Y296 219 aa8.5□□□□□ -1.05
LSM5-208ENST00000450169 MFHAS1Q9Y4C4 1052 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms