RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 LKAAEAR1Q8TD35 194 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 HHIPL1Q96JK4 782 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 HBEGFQ99075 208 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 BOCQ9BWV1 1114 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 SMPD3Q9NY59 655 aaPredicted RBP16.66■□□□□ 0.26
TOM1-210ENST00000449058 GNPTGQ9UJJ9 305 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 TSR3Q9UJK0 312 aaKnown RBP16.66■□□□□ 0.26
TOM1-210ENST00000449058 OARD1Q9Y530 152 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 TRBV5-4A0A0C4DH59 114 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 K7ERQ8 282 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 SOX11P35716 441 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 RPS9P46781 194 aaKnown RBP16.66■□□□□ 0.26
TOM1-210ENST00000449058 PPP3CCP48454 512 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 SMAD3P84022 425 aaKnown RBP16.66■□□□□ 0.26
TOM1-210ENST00000449058 CYBRD1Q53TN4 286 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 TPGS2Q68CL5 300 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 GLYATQ6IB77 296 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 TMEM150AQ86TG1 271 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 RAET1EQ8TD07 263 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 ADAMTS19Q8TE59 1207 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 CGREF1Q99674 301 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 OCEL1Q9H607 264 aa16.66■□□□□ 0.26
TOM1-210ENST00000449058 OBSL1O75147 1896 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 KATNA1O75449 491 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 RSL1D1O76021 490 aaKnown RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 INHAP05111 366 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 MBL2P11226 248 aaPredicted RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 CDH1P12830 882 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 MSH3P20585 1137 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 CAPGP40121 348 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 HSPA7P48741 367 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 RGS4P49798 205 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 NFATC2Q13469 925 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 PWP1Q13610 501 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 SELPLGQ14242 412 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 TAF12Q16514 161 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 PYCR3Q53H96 274 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 HABP4Q5JVS0 413 aaKnown RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 KIAA1841Q6NSI8 718 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 RNF165Q6ZSG1 346 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 SNX20Q7Z614 316 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 MILR1Q7Z6M3 343 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 RALGPS2Q86X27 583 aaPredicted RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 ERI1Q8IV48 349 aaKnown RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 CD99L2Q8TCZ2 262 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 PPP3R2Q96LZ3 170 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 NSMCE2Q96MF7 247 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 PPM1MQ96MI6 270 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 CHID1Q9BWS9 393 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 FAM126AQ9BYI3 521 aaPredicted RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 PIF1Q9H611 641 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 TIMMDC1Q9NPL8 285 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 POLR3HQ9Y535 204 aaPredicted RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 FADS3Q9Y5Q0 445 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 PRSS21Q9Y6M0 314 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 KIAA1671Q9BY89 1806 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 CLOCKO15516 846 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 VARSP26640 1264 aaKnown RBP16.65■□□□□ 0.26
TOM1-210ENST00000449058 HMOX2P30519 316 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 DGKQP52824 942 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 CDKN3Q16667 212 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 LPCAT2Q7L5N7 544 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 DTWD1Q8N5C7 304 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 DHRSXQ8N5I4 330 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 NUDT8Q8WV74 236 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 CYGBQ8WWM9 190 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 FBXL20Q96IG2 436 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 SLC22A12Q96S37 553 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 SEPHS2Q99611 448 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 SEZ6LQ9BYH1 1024 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 TM6SF2Q9BZW4 377 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 ASB8Q9H765 288 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 ZFYVE1Q9HBF4 777 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 IL26Q9NPH9 171 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 ETAA1Q9NY74 926 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 ATXN10Q9UBB4 475 aa16.65■□□□□ 0.26
TOM1-210ENST00000449058 TRBC1P01850 177 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 ITGB6P18564 788 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 DGKAP23743 735 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 MTPNP58546 118 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 CRY1Q16526 586 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 AAK1Q2M2I8 961 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 SMU1Q2TAY7 513 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 Q6ZNB5 142 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 USP51Q70EK9 711 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 PATL1Q86TB9 770 aaKnown RBP16.64■□□□□ 0.25
TOM1-210ENST00000449058 OR8J3Q8NGG0 315 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 UBTD2Q8WUN7 234 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 HMX1Q9NP08 348 aaPredicted RBP16.64■□□□□ 0.25
TOM1-210ENST00000449058 TULP3O75386 442 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 PRSS23O95084 383 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 SLC25A14O95258 325 aaPredicted RBP16.64■□□□□ 0.25
TOM1-210ENST00000449058 MT-ND1P03886 318 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 BMP1P13497 986 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 ITGALP20701 1170 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 ACRV1P26436 265 aa16.64■□□□□ 0.25
TOM1-210ENST00000449058 ADARB1P78563 741 aaKnown RBP16.64■□□□□ 0.25
TOM1-210ENST00000449058 CDH18Q13634 790 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms