RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 TBC1D29Q9UFV1 150 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 SHOC2Q9UQ13 582 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 NAV2Q8IVL1 2488 aa13.53□□□□□ -0.24
PDLIM2-213ENST00000448520 NBASA2RRP1 2371 aa13.52□□□□□ -0.24
PDLIM2-213ENST00000448520 C1orf232A0A0U1RR37 186 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 ERI2A8K979 691 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 A8MU76 341 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 GPR89AB7ZAQ6 455 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 AURKAO14965 403 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 BUD23O43709 281 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 GPR89BP0CG08 455 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 MYBL2P10244 700 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 F3P13726 295 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 MGAT1P26572 445 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 CLCNKAP51800 687 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 NFKB2Q00653 900 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 MC1RQ01726 317 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 ABHD18Q0P651 414 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 CALCOCO2Q13137 446 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 MSLNQ13421 630 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 MORF4L2Q15014 288 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 SNAP47Q5SQN1 464 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 ZNF761Q86XN6 746 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 PLXDC1Q8IUK5 500 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 MCUQ8NE86 351 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 PMEPA1Q969W9 287 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 PPP1R2P1Q96PQ5 205 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 TRIM56Q9BRZ2 755 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 TRIM4Q9C037 500 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 GPN2Q9H9Y4 310 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 SYBUQ9NX95 663 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 NFU1Q9UMS0 254 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 KCTD3Q9Y597 815 aa13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 OAS3Q9Y6K5 1087 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-213ENST00000448520 GRID2O43424 1007 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 NUAK1O60285 661 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 EML2O95834 649 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 EPOP01588 193 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 HLA-DPA1P20036 260 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 DRG2P55039 364 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 POLE2P56282 527 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 KCNAB2Q13303 367 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 NFATC2Q13469 925 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 SEPT6Q14141 434 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 PTPRCAPQ14761 206 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 POU6F1Q14863 301 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 CCDC38Q502W7 563 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 CRTC2Q53ET0 693 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 LRRC8BQ6P9F7 803 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 PCGF5Q86SE9 256 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 LINC00523Q86TU6 105 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 HOOK3Q86VS8 718 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 DNAAF3Q8N9W5 541 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 BBOF1Q8ND07 529 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 BLOC1S5Q8TDH9 187 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 WDR83Q9BRX9 315 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 UCK1Q9HA47 277 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 TRIM39Q9HCM9 518 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 FAM114A2Q9NRY5 505 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 RAD18Q9NS91 495 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 CPNE7Q9UBL6 633 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 KCNK6Q9Y257 313 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 PRKAB1Q9Y478 270 aa13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 TMEM184BQ9Y519 407 aaPredicted RBP13.51□□□□□ -0.25
PDLIM2-213ENST00000448520 DOPEY2Q9Y3R5 2298 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 A6NCN8 305 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 FADS2P1A8MWK0 482 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 POLR1CO15160 346 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 SNX2O60749 519 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 SLC25A14O95258 325 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 ACP5P13686 325 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 XRCC1P18887 633 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 MAGEA3P43357 314 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 TNNT3P45378 269 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 VSNL1P62760 191 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 CDK16Q00536 496 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 DHX9Q08211 1270 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 CDH17Q12864 832 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 MAP7Q14244 749 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 FASTKD3Q14CZ7 662 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 BBS9Q3SYG4 887 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 PDPK2PQ6A1A2 396 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 PHYKPLQ8IUZ5 450 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 IGDCC3Q8IVU1 814 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 IFT20Q8IY31 132 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 EID2BQ96D98 161 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 SRPK1Q96SB4 655 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 ZFYVE1Q9HBF4 777 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 ARNT2Q9HBZ2 717 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 MAGEE1Q9HCI5 957 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 ZNF711Q9Y462 761 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 PCYT1BQ9Y5K3 369 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 ARL5AQ9Y689 179 aa13.5□□□□□ -0.25
PDLIM2-213ENST00000448520 LOC101059948A0A1B0GTJ6 334 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 CCL22O00626 93 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 TOX3O15405 576 aaPredicted RBP13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 NKX2-8O15522 239 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 STK17BO94768 372 aa13.49□□□□□ -0.25
PDLIM2-213ENST00000448520 ANKRD34CP0C6C1 535 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms