RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 MTF1Q14872 753 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 KCTD19Q17RG1 926 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF674Q2M3X9 581 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 UBE2R2Q712K3 238 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 DPY19L4Q7Z388 723 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 REPS2Q8NFH8 660 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 POTEKPQ9BYX7 375 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 COMMD3Q9UBI1 195 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RIMKLBQ9ULI2 386 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 HTR3EA5X5Y0 456 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 E7EQ34 232 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 VAPBO95292 243 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 APOC3P02656 99 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 CTPS1P17812 591 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 EFEMP1Q12805 493 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SCARB2Q14108 478 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 FGL2Q14314 439 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 DPYSL2Q16555 572 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 HFE2Q6ZVN8 426 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 NOA1Q8NC60 698 aaKnown RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ATP13A3Q9H7F0 1226 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 CDHR5Q9HBB8 845 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 CAPN6Q9Y6Q1 641 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 UMODL1Q5DID0 1318 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 MYMKA6NI61 221 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 TRAFD1O14545 582 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 FARS2O95363 451 aaKnown RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 APOA2P02652 100 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 LCKP06239 509 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 C6orf222P0C671 652 aaPredicted RBP8.84□□□□□ -0.99
NIPBL-202ENST00000448238 SLC35G4P0C7Q5 338 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 RFC3P40938 356 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 MVKQ03426 396 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ZNF616Q08AN1 781 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 COX15Q7KZN9 410 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 PARP8Q8N3A8 854 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 AGAP11Q8TF27 550 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 C8orf48Q96LL4 319 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ABCG4Q9H172 646 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 HIPK2Q9H2X6 1198 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 AGPAT5Q9NUQ2 364 aa8.84□□□□□ -0.99
NIPBL-202ENST00000448238 ATP6AP2A0A1C7CYW4 349 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 ERAL1O75616 437 aaKnown RBP8.84□□□□□ -1
NIPBL-202ENST00000448238 TLE1Q04724 770 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 EXOSC6Q5RKV6 272 aaKnown RBP8.84□□□□□ -1
NIPBL-202ENST00000448238 PHTF2Q8N3S3 785 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 OR6K6Q8NGW6 343 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 FBXO25Q8TCJ0 367 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 ARL11Q969Q4 196 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 BSCL2Q96G97 398 aaPredicted RBP8.84□□□□□ -1
NIPBL-202ENST00000448238 MFSD1Q9H3U5 465 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 POLD4Q9HCU8 107 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 PTPRHQ9HD43 1115 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 PARPBPQ9NWS1 579 aa8.84□□□□□ -1
NIPBL-202ENST00000448238 THUMPD1Q9NXG2 353 aaKnown RBP8.84□□□□□ -1
NIPBL-202ENST00000448238 AK6Q9Y3D8 172 aaKnown RBP8.84□□□□□ -1
NIPBL-202ENST00000448238 A6NHS1 94 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 RAD51DO75771 328 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 RHOP08100 348 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 PLEKP08567 350 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 RNF151Q2KHN1 245 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ESPNLQ6ZVH7 1005 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 SPATA6LQ8N4H0 392 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CXorf40AQ8TE69 158 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 SERINC1Q9NRX5 453 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 PLEKHG2Q9H7P9 1386 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ABCA5Q8WWZ7 1642 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 HMGN1P05114 100 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CHRNB4P30926 498 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 TRIM23P36406 574 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 MMP13P45452 471 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 MRPL49Q13405 166 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 TIGD6Q17RP2 521 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 PARP6Q2NL67 630 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 FNDC3BQ53EP0 1204 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 ADGRF2Q8IZF7 708 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 POLR2J2Q9GZM3 115 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 TMEM185BQ9H7F4 350 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 BRF2Q9HAW0 419 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 SEMA4BQ9NPR2 832 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 EDC4Q6P2E9 1401 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 MYOM2P54296 1465 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CLUHO75153 1309 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 FAM149AA5PLN7 773 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 USP27XA6NNY8 438 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ACOX3O15254 700 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 THP07101 528 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ZBTB48P10074 688 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 FNTBP49356 437 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 PRKXP51817 358 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CCNHP51946 323 aaPredicted RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 MXD1Q05195 221 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 AUHQ13825 339 aaKnown RBP8.83□□□□□ -1
NIPBL-202ENST00000448238 GRM4Q14833 912 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 ADGRF4Q8IZF3 695 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CRYBG2Q8N1P7 616 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 CHTF18Q8WVB6 975 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 PGM2Q96G03 612 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 MTFR1LQ9H019 292 aa8.83□□□□□ -1
NIPBL-202ENST00000448238 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms