RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	MMP2	P08253	660 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TPTE	P56180	551 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	NCS1	P62166	190 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TIAL1	Q01085	375 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	KCNAB2	Q13303	367 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TSTA3	Q13630	321 aa	Predicted RBP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	CTU2	Q2VPK5	515 aa	Known RBP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	FAM45BP	Q6NSW5	357 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	GLT6D1	Q7Z4J2	308 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TMEM179B	Q7Z7N9	219 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	RASAL3	Q86YV0	1011 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	LRRC49	Q8IUZ0	686 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	SLC38A6	Q8IZM9	456 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	C10orf111	Q8N326	155 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	FAM45A	Q8TCE6	357 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	HM13	Q8TCT9	377 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	ADAM2	Q99965	735 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	FUNDC2	Q9BWH2	189 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	SLC25A51	Q9H1U9	297 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	CCSER2	Q9H7U1	834 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TBC1D14	Q9P2M4	693 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	KL	Q9UEF7	1012 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TBKBP1	A7MCY6	615 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TNPO2	O14787	897 aa	Known RBP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	AQP9	O43315	295 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	RASAL1	O95294	804 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	CRYZL1	O95825	349 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	THRB	P10828	461 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	KCNE1	P15382	129 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	EPHA2	P29317	976 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	HK3	P52790	923 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	ARSF	P54793	590 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	DNAJB13	P59910	316 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	SCAP	Q12770	1279 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	DDX39B	Q13838	428 aa	Known RBP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	SMU1	Q2TAY7	513 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	SOWAHC	Q53LP3	525 aa	Predicted RBP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	SIGIRR	Q6IA17	410 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	ZDHHC13	Q8IUH4	622 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	GPC2	Q8N158	579 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	ESX1	Q8N693	406 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TNIP2	Q8NFZ5	429 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	CCDC126	Q96EE4	140 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	TSSK3	Q96PN8	268 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	ABHD16B	Q9H3Z7	469 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	CCDC177	Q9NQR7	707 aa	Predicted RBP	12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	DERA	Q9Y315	318 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	SPEF1	Q9Y4P9	236 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	ANGPTL3	Q9Y5C1	460 aa		12.36	□□□□□ -0.43
DDR1-238	ENST00000446312	RRN3P2	A6NIE6	340 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	CXCL11	O14625	94 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	NADK	O95544	446 aa	Predicted RBP	12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	PFKL	P17858	780 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ATP6V0D1	P61421	351 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	C6orf136	Q5SQH8	315 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	MRNIP	Q6NTE8	343 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	DEPDC4	Q8N2C3	294 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	CDKN2AIPNL	Q96HQ2	116 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	AP5M1	Q9H0R1	490 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	RAD21L1	Q9H4I0	556 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	NSUN3	Q9H649	340 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	SLC6A13	Q9NSD5	602 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	CDH9	Q9ULB4	789 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	PCDHA9	Q9Y5H5	950 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	SI	P14410	1827 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312		G3V2T6	193 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	CCRL2	O00421	344 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ALPI	P09923	528 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	HTR1B	P28222	390 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ERVPABLB-1	P60509	514 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	CD47	Q08722	323 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	LCP2	Q13094	533 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	TP53BP2	Q13625	1128 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	MS4A13	Q5J8X5	152 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	INTS6L	Q5JSJ4	861 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	SPANXN4	Q5MJ08	99 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	CNTN4	Q8IWV2	1026 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	SFRP1	Q8N474	314 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	NATD1	Q8N6N6	113 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	DTX3	Q8N9I9	347 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	BRI3BP	Q8WY22	251 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	PYCR2	Q96C36	320 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	GKN1	Q9NS71	199 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	GIMAP4	Q9NUV9	329 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ERVK-18	Q9QC07	812 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	NEU3	Q9UQ49	428 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	GPR45	Q9Y5Y3	372 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312		A0A1W2PP18	115 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312		M0R3G1	203 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ICMT	O60725	284 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	PRAMEF12	O95522	483 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	RPL34	P49207	117 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ABRAXAS2	Q15018	415 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	FSCN1	Q16658	493 aa	Known RBP	12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	RGMB	Q6NW40	437 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	GPSM1	Q86YR5	675 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	ABHD11	Q8NFV4	315 aa		12.35	□□□□□ -0.43
DDR1-238	ENST00000446312	IMP4	Q96G21	291 aa	Known RBP	12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms