RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ARCN1P48444 511 aaKnown RBP10.62□□□□□ -0.71
SF3A1-203ENST00000444440 RAB15P59190 212 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 KCNAB1Q14722 419 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 DBN1Q16643 649 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 LONRF2Q1L5Z9 754 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 ZRANB3Q5FWF4 1079 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 SEL1L2Q5TEA6 688 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 CAPRIN2Q6IMN6 1127 aaKnown RBP10.62□□□□□ -0.71
SF3A1-203ENST00000444440 IRGCQ6NXR0 463 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 FBXO38Q6PIJ6 1188 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 PRSS42Q7Z5A4 293 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 CACNA2D3Q8IZS8 1091 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 CLDN19Q8N6F1 224 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 KLHL6Q8WZ60 621 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 LRRC45Q96CN5 670 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 WBP1Q96G27 269 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 ZNF778Q96MU6 729 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 PPP1R2P1Q96PQ5 205 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 LZTFL1Q9NQ48 299 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 EPHA6Q9UF33 1036 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 IL17BQ9UHF5 180 aa10.62□□□□□ -0.71
SF3A1-203ENST00000444440 TMEM184BQ9Y519 407 aaPredicted RBP10.62□□□□□ -0.71
SF3A1-203ENST00000444440 MRPS18BQ9Y676 258 aaKnown RBP10.62□□□□□ -0.71
SF3A1-203ENST00000444440 ZNF462Q96JM2 2506 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 ANKRD12Q6UB98 2062 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 RELNP78509 3460 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 POLR1CO15160 346 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-203ENST00000444440 RASSF9O75901 435 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 FOXN2P32314 431 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 HADHAP40939 763 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 PREPP48147 710 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 PDE1BQ01064 536 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 FOXM1Q08050 763 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 SEMA3AQ14563 771 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 RPS6KA1Q15418 735 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 TBR1Q16650 682 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 P3H1Q32P28 736 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 CACHD1Q5VU97 1274 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 CEACAM20Q6UY09 585 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 NAPRTQ6XQN6 538 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 RBM12BQ8IXT5 1001 aaKnown RBP10.61□□□□□ -0.71
SF3A1-203ENST00000444440 CFAP206Q8IYR0 622 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 IL22RA1Q8N6P7 574 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 OR13J1Q8NGT2 312 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 HM13Q8TCT9 377 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 STYXQ8WUJ0 223 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 ULK4Q96C45 1275 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 ELMO2Q96JJ3 720 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 ZNF514Q96K75 400 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-203ENST00000444440 OR6C1Q96RD1 312 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 COPS8Q99627 209 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 MAP3K3Q99759 626 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 C19orf43Q9BQ61 176 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 TLR10Q9BXR5 811 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 ASPSCR1Q9BZE9 553 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 RAB33BQ9H082 229 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 OR52A5Q9H2C5 316 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 COG4Q9H9E3 785 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 ZDHHC3Q9NYG2 299 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 SEMA5BQ9P283 1151 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 FEZ2Q9UHY8 353 aaPredicted RBP10.61□□□□□ -0.71
SF3A1-203ENST00000444440 SLC24A2Q9UI40 661 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 PCDHB11Q9Y5F2 797 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 HELZ2Q9BYK8 2649 aaKnown RBP10.61□□□□□ -0.71
SF3A1-203ENST00000444440 MDC1Q14676 2089 aaKnown RBP10.61□□□□□ -0.71
SF3A1-203ENST00000444440 HEATR5BQ9P2D3 2071 aa10.61□□□□□ -0.71
SF3A1-203ENST00000444440 SEC16AO15027 2179 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 CCDC162PA2VCL2 907 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 OR5K3A6NET4 321 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 SUN1O94901 812 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 IFNB1P01574 187 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 SLC35G4P0C7Q5 338 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 FAM87AP0C7U9 286 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 PLA2G2AP14555 144 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 FOLR1P15328 257 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 NELFEP18615 380 aaKnown RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 MSNP26038 577 aaKnown RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 RPL22P35268 128 aaKnown RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 ATP1A2P50993 1020 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 KPNA2P52292 529 aaKnown RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 C19orf57Q0VDD7 668 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 SEMA5AQ13591 1074 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 PLCL1Q15111 1095 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 GPR33Q49SQ1 333 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 ATP1A1-AS1Q5TC04 95 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 ZNF534Q76KX8 674 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 TAS2R42Q7RTR8 314 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 NLGN4XQ8N0W4 816 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 NLGN4YQ8NFZ3 816 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 TRIM58Q8NG06 486 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 DCUN1D1Q96GG9 259 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 SLC41A2Q96JW4 573 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 TEFMQ96QE5 360 aaKnown RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 FRMD8P1Q9BZ68 369 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 KIR3DX1Q9H7L2 352 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 AKIRIN1Q9H9L7 192 aaPredicted RBP10.6□□□□□ -0.71
SF3A1-203ENST00000444440 CASS4Q9NQ75 786 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 ACSL5Q9ULC5 683 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 ZNF148Q9UQR1 794 aa10.6□□□□□ -0.71
SF3A1-203ENST00000444440 PPP2R2CQ9Y2T4 447 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms