RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 MSS51Q4VC12 460 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 SPANXN3Q5MJ09 141 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 DUPD1Q68J44 220 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 WDR74Q6RFH5 385 aaPredicted RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 UNQ6494/PRO21346Q6UXR6 183 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 LDB1Q86U70 411 aaPredicted RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 CILP2Q8IUL8 1156 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 OTUD6BQ8N6M0 293 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 MNS1Q8NEH6 495 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 OR4D9Q8NGE8 314 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 ELMO1Q92556 727 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 TMEM159Q96B96 161 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 NXPE2Q96DL1 559 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 AHCYL2Q96HN2 611 aaKnown RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 PANX3Q96QZ0 392 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 INSM2Q96T92 566 aaPredicted RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 STRADBQ9C0K7 418 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 WWP1Q9H0M0 922 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 OR52A5Q9H2C5 316 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 EPB41L5Q9HCM4 733 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 INTS10Q9NVR2 710 aaKnown RBP14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 PSMD13Q9UNM6 376 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 SNX24Q9Y343 169 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 PCDHB1Q9Y5F3 818 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 COLEC10Q9Y6Z7 277 aa14.71□□□□□ -0.05
CSNK1E-210ENST00000442216 SLC5A10A0PJK1 596 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 TRABD2BA6NFA1 517 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 E7ESA3 106 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 H3BMM5 538 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 IFRD1O00458 451 aaPredicted RBP14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 KPNA5O15131 536 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 CASC3O15234 703 aaKnown RBP14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 LIMK2P53671 638 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 CAV1Q03135 178 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 TRA2AQ13595 282 aaKnown RBP eCLIP14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 CRYMQ14894 314 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 BBS9Q3SYG4 887 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 AMZ1Q400G9 498 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 TMEM71Q6P5X7 295 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 SLITRK4Q8IW52 837 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 LILRA3Q8N6C8 439 aaPredicted RBP14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 LPGAT1Q92604 370 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 RMDN2Q96LZ7 410 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 C12orf66Q96MD2 445 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 TRIM56Q9BRZ2 755 aaKnown RBP14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 FAM167BQ9BTA0 163 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 PDP2Q9P2J9 529 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 FAM8A1Q9UBU6 413 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 ATXN7L1Q9ULK2 861 aaPredicted RBP14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 TEX264Q9Y6I9 313 aa14.7□□□□□ -0.06
CSNK1E-210ENST00000442216 CCDC187A0A096LP49 1063 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 GOLGA8KD6RF30 607 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 GOLGA8TH3BQL2 631 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 EIF3HO15372 352 aaKnown RBP eCLIP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 ESR1P03372 595 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 ELK3P41970 407 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 MLLT3P42568 568 aaPredicted RBP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 LSSP48449 732 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 GPR18Q14330 331 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 FRG1Q14331 258 aaKnown RBP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 ZNF470Q6ECI4 717 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 PTRHD1Q6GMV3 140 aaKnown RBP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 IGF2-ASQ6U949 168 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 USP53Q70EK8 1073 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 CENPUQ71F23 418 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 PDZD3Q86UT5 571 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 KCNMB4Q86W47 210 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 ZNF761Q86XN6 746 aaPredicted RBP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 MARCH9Q86YJ5 346 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 LSMEM2Q8N112 164 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 MMGT1Q8N4V1 131 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 WDR36Q8NI36 951 aaKnown RBP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 ASZ1Q8WWH4 475 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 ATXN7L3BQ96GX2 97 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 BIRC8Q96P09 236 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 PHACTR1Q9C0D0 580 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 RDH14Q9HBH5 336 aa14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 C20orf96Q9NUD7 363 aaPredicted RBP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 IMP3Q9NV31 184 aaKnown RBP14.69□□□□□ -0.06
CSNK1E-210ENST00000442216 UBA6A0AVT1 1052 aaPredicted RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 C1QTNF9BB2RNN3 333 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 HGSO14964 777 aaPredicted RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 GPC4O75487 556 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 BANF1O75531 89 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 UBXN7O94888 489 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 S1PR4O95977 384 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 CAPNS1P04632 268 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 PROS1P07225 676 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 C1QTNF9P0C862 333 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 AOAHP28039 575 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 CCR7P32248 378 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 CSF2RBP32927 897 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 EIF3BP55884 814 aaKnown RBP14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 CFHR1Q03591 330 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 TMED2Q15363 201 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 SYTL3Q4VX76 610 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 NKAIN2Q5VXU1 208 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 STEAP4Q687X5 459 aa14.68□□□□□ -0.06
CSNK1E-210ENST00000442216 C8orf74Q6P047 294 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms