RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 COL4A6Q14031 1691 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 NUP205Q92621 2012 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRSS51A0A1B0GVH4 220 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 VILLO15195 856 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 KDM1AO60341 852 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 PRAMEF11O60813 436 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 JUNP05412 331 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 GARSP41250 739 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 CLCN2P51788 898 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ALDH18A1P54886 795 aaKnown RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 AQP4P55087 323 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 DLG1Q12959 904 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 GRIK2Q13002 908 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 DEFB133Q30KQ1 61 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 SEL1L3Q68CR1 1132 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 DENND5AQ6IQ26 1287 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 IZUMO2Q6UXV1 221 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM126BQ8IUX1 230 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 CENPLQ8N0S6 344 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 FBXW8Q8N3Y1 598 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 METTL25Q8N6Q8 603 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF781Q8N8C0 355 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 CADM4Q8NFZ8 388 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 OR2A12Q8NGT7 310 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 TSACCQ96A04 125 aaPredicted RBP7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 WDR92Q96MX6 357 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF599Q96NL3 588 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 OR52B2Q96RD2 323 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 ARHGAP9Q9BRR9 750 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 THTPAQ9BU02 230 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 GSDMCQ9BYG8 508 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 RETREG1Q9H6L5 497 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 SNX15Q9NRS6 342 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 OXSMQ9NWU1 459 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 HACD3Q9P035 362 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 TRHDEQ9UKU6 1024 aa7.29□□□□□ -1.24
CDC42BPA-208ENST00000442054 DRGXA6NNA5 263 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PDLIM1O00151 329 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 MATN3O15232 486 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 SLC7A4O43246 635 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 IGLV3-25P01717 112 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 F7P08709 466 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 NEFHP12036 1026 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 NFKB1P19838 968 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ITGB7P26010 798 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PTPN3P26045 913 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ARCN1P48444 511 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 HCAR3P49019 387 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 LAMB3Q13751 1172 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TRIP6Q15654 476 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 C9orf64Q5T6V5 341 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 Q6ZVL8 140 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CHSY3Q70JA7 882 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CRLF3Q8IUI8 442 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CTAGE3PQ8IX95 158 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 UMODL1-AS1Q8N2C9 162 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PDCD7Q8N8D1 485 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PNPLA1Q8N8W4 532 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMEM102Q8N9M5 508 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TMIEQ8NEW7 156 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PPHLN1Q8NEY8 458 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 DUS3LQ96G46 650 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 FOPNLQ96NB1 174 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 AGAP2Q99490 1192 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ELF4Q99607 663 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 RTKNQ9BST9 563 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 STRADBQ9C0K7 418 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 RSPH9Q9H1X1 276 aaPredicted RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ASB8Q9H765 288 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 COG4Q9H9E3 785 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PAPOLBQ9NRJ5 636 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 HS3ST2Q9Y278 367 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 A0A1W2PPC4 97 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TRIM64A6NGJ6 449 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ENO4A6NNW6 628 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 USP12O75317 370 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 AP2A1O95782 977 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PYGLP06737 847 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZNF806P0C7X5 589 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CCNCP24863 283 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 GRK2P25098 689 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PSMB4P28070 264 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PEX2P28328 305 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ADPRHP54922 357 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PPIDQ08752 370 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 LSAMPQ13449 338 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 TLR1Q15399 786 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CDKN3Q16667 212 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 MUM1Q2TAK8 710 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 METTL21CQ5VZV1 264 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CXorf57Q6NSI4 855 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 ZBTB44Q8NCP5 570 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CERS2Q96G23 380 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PHOX2BQ99453 314 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 CPNE1Q99829 537 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 GABRG3Q99928 467 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 MRM3Q9HC36 420 aaKnown RBP7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 PDP2Q9P2J9 529 aa7.28□□□□□ -1.24
CDC42BPA-208ENST00000442054 GPR34Q9UPC5 381 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms