RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 SNX20Q7Z614 316 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 CFAP206Q8IYR0 622 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 LRRC57Q8N9N7 239 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 NAT14Q8WUY8 206 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 HEXDCQ8WVB3 486 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 APOBEC4Q8WW27 367 aaKnown RBP18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 INSM2Q96T92 566 aaPredicted RBP18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 CD180Q99467 661 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 COPS8Q99627 209 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 RBSNQ9H1K0 784 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 HRASLS2Q9NWW9 162 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 CROTQ9UKG9 612 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 RARRES3Q9UL19 164 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 COLEC10Q9Y6Z7 277 aa18.03■□□□□ 0.48
AC004540.1-201ENST00000439120 IGHV5-51A0A0C4DH38 117 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 OR5K3A6NET4 321 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 TLCD2A6NGC4 264 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 MIF4GDA9UHW6 222 aaKnown RBP18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 KATNA1O75449 491 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 POLBP06746 335 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 OAS2P29728 719 aaKnown RBP18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 ZNF140P52738 457 aaPredicted RBP18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 XIAPP98170 497 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 ACY1Q03154 408 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 KIF5AQ12840 1032 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 DUS1LQ6P1R4 473 aaKnown RBP18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 KMT5CQ86Y97 462 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 NXPE1Q8N323 547 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 HM13Q8TCT9 377 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 ZFPM2Q8WW38 1151 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 SLC41A2Q96JW4 573 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 LINC00615Q96LM1 132 aaPredicted RBP18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 MAP3K3Q99759 626 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 CCM2Q9BSQ5 444 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 FAM96AQ9H5X1 160 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 VPS37BQ9H9H4 285 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 KCND3Q9UK17 655 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 HEBP2Q9Y5Z4 205 aa18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 MRPS18BQ9Y676 258 aaKnown RBP18.02■□□□□ 0.48
AC004540.1-201ENST00000439120 OR6C74A6NCV1 312 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 SUV39H1O43463 412 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 ATP1B2P14415 290 aaPredicted RBP18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 NDUFS1P28331 727 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 MC4RP32245 332 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 PRKAA1Q13131 559 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 KCNAB1Q14722 419 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 PARP6Q2NL67 630 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 GPR33Q49SQ1 333 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 CRTC2Q53ET0 693 aaPredicted RBP18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 ZRANB3Q5FWF4 1079 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 TMTC4Q5T4D3 741 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 ZNF449Q6P9G9 518 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 BPHLQ86WA6 291 aaPredicted RBP18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 PTRH1Q86Y79 214 aaKnown RBP18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 FAM71DQ8N9W8 422 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 SPDYE1Q8NFV5 336 aaPredicted RBP18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 C9orf43Q8TAL5 461 aaPredicted RBP18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 ALS2CR12Q96Q35 445 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 C19orf43Q9BQ61 176 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 KIR3DX1Q9H7L2 352 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 LRRC40Q9H9A6 602 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 ARNT2Q9HBZ2 717 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 SLC24A2Q9UI40 661 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 PADI1Q9ULC6 663 aa18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 PACSIN2Q9UNF0 486 aaPredicted RBP18.01■□□□□ 0.47
AC004540.1-201ENST00000439120 CCL22O00626 93 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 EBLN1P0CF75 366 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 FOLR1P15328 257 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 PRLHRP49683 370 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 CSRP3P50461 194 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 HSD11B2P80365 405 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 P3H1Q32P28 736 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 ATP1A1-AS1Q5TC04 95 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 DENND5AQ6IQ26 1287 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 TAS2R42Q7RTR8 314 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 DNAJC1Q96KC8 554 aaKnown RBP18■□□□□ 0.47
AC004540.1-201ENST00000439120 SOHLH2Q9NX45 425 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 SEMA5BQ9P283 1151 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 TENM4Q6N022 2769 aa18■□□□□ 0.47
AC004540.1-201ENST00000439120 GOLGA6L3A6NEY3 463 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 AGAP14A8MT82 685 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 IFRD1O00458 451 aaPredicted RBP17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 PSMD3O43242 534 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 LDB2O43679 373 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 FTCDO95954 541 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 F8A1P23610 371 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 ERV3-1Q14264 604 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 RMDN2Q96LZ7 410 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 FCRL4Q96PJ5 515 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 FGF21Q9NSA1 209 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 ZDHHC3Q9NYG2 299 aa17.99■□□□□ 0.47
AC004540.1-201ENST00000439120 C17orf113A0A1B0GUU1 675 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 TERTO14746 1132 aaKnown RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 SGTAO43765 313 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 TIAF1O95411 115 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 ZBTB11O95625 1053 aaPredicted RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 TPH1P17752 444 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 ACRV1P26436 265 aa17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 ARCN1P48444 511 aaKnown RBP17.98■□□□□ 0.47
AC004540.1-201ENST00000439120 MSLNQ13421 630 aaPredicted RBP17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms