RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 HEBP2Q9Y5Z4 205 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 COLEC10Q9Y6Z7 277 aa24.19■■□□□ 1.46
RAPGEF1-206ENST00000438647 PRAMEF33A0A0G2JMD5 474 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 A8MU76 341 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 B4E171 279 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 TOX3O15405 576 aaPredicted RBP24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 PHF2O75151 1096 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 C9P02748 559 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 FTH1P02794 183 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 POLBP06746 335 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 FGF3P11487 239 aaPredicted RBP24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 NDUFS1P28331 727 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 TSPAN7P41732 249 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 FNTAP49354 379 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 RAB15P59190 212 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 RPA4Q13156 261 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 PLCL1Q15111 1095 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 FAM129CQ86XR2 697 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 ZDHHC12Q96GR4 267 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 INSM2Q96T92 566 aaPredicted RBP24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 COG4Q9H9E3 785 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 CHRAC1Q9NRG0 131 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 PCDHGA3Q9Y5H0 932 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 FAM208BQ5VWN6 2430 aa24.18■■□□□ 1.46
RAPGEF1-206ENST00000438647 CHD6Q8TD26 2715 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 EFCAB7A8K855 629 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 IFRD1O00458 451 aaPredicted RBP24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 CAPN5O15484 640 aaPredicted RBP24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 PRAMEF10O60809 474 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 ANKRD34CP0C6C1 535 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 OR56A5P0C7T3 313 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 MAGEA6P43360 314 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 KRT33BQ14525 404 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 KCNJ11Q14654 390 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 ARMC3Q5W041 872 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 CAPRIN2Q6IMN6 1127 aaKnown RBP24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 MICALCLQ6ZW33 695 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 RSC1A1Q92681 617 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 C9orf72Q96LT7 481 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 ASPSCR1Q9BZE9 553 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 RAB33BQ9H082 229 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 MRM3Q9HC36 420 aaKnown RBP24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 EPHA6Q9UF33 1036 aa24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 CFAP20Q9Y6A4 193 aaKnown RBP24.17■■□□□ 1.46
RAPGEF1-206ENST00000438647 USP27XA6NNY8 438 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 C9orf172C9J069 976 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 GFERP55789 205 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 TMPRSS3P57727 454 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 XKR5Q6UX68 686 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 ZNF534Q76KX8 674 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 PDZD3Q86UT5 571 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 LILRA3Q8N6C8 439 aaPredicted RBP24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 SPDYE1Q8NFV5 336 aaPredicted RBP24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 ART4Q93070 314 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 RMDN2Q96LZ7 410 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 TGM7Q96PF1 710 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 DDA1Q9BW61 102 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 CATSPERZQ9NTU4 200 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 SLC39A1Q9NY26 324 aa24.16■■□□□ 1.46
RAPGEF1-206ENST00000438647 AHCTF1Q8WYP5 2266 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 LIN7AO14910 233 aaPredicted RBP24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 LIPCP11150 499 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 MGAT1P26572 445 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 CD151P48509 253 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 GNG11P61952 73 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 CRADDP78560 199 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 DCAF12Q5T6F0 453 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 TEFMQ96QE5 360 aaKnown RBP24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 KIFC1Q9BW19 673 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 KIR3DX1Q9H7L2 352 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 TREX1Q9NSU2 369 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 OCIAD1Q9NX40 245 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 FOXJ2Q9P0K8 574 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 PCDHB11Q9Y5F2 797 aa24.15■■□□□ 1.46
RAPGEF1-206ENST00000438647 ITPR1Q14643 2758 aa24.14■■□□□ 1.46
RAPGEF1-206ENST00000438647 TCRBV7S3A2A0A539 114 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 ZNF185O15231 689 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 RASSF9O75901 435 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 TTPAP49638 278 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 TERF1P54274 439 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 PLOD1Q02809 727 aaPredicted RBP24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 CLN3Q13286 438 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 ZNF658BQ4V348 819 aaPredicted RBP24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 IRGCQ6NXR0 463 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 DUS1LQ6P1R4 473 aaKnown RBP24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 BMPERQ8N8U9 685 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 TSSK1BQ9BXA7 367 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 OR52A5Q9H2C5 316 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 SYBUQ9NX95 663 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 PRSS21Q9Y6M0 314 aa24.14■■□□□ 1.45
RAPGEF1-206ENST00000438647 PTPRQQ9UMZ3 2332 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 IQCJ-SCHIP1C9J366 451 aaPredicted RBP24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 STMND1H3BQB6 276 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 MLNP12872 115 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 MC2RQ01718 297 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 PRSS42Q7Z5A4 293 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 OOSP2Q86WS3 158 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 MPP5Q8N3R9 675 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 MCUQ8NE86 351 aa24.13■■□□□ 1.45
RAPGEF1-206ENST00000438647 CPT1BQ92523 772 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms