RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 CCDC3Q9BQI4 270 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 FAM129AQ9BZQ8 928 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 SMYD2Q9NRG4 433 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 CPNE7Q9UBL6 633 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 SLC5A10A0PJK1 596 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 NUDT21O43809 227 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 NIPSNAP2O75323 286 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 GP1BAP07359 652 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 PKMP14618 531 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 SLC2A4P14672 509 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 XRCC1P18887 633 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 FASLGP48023 281 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 LEPRP48357 1165 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 CSE1LP55060 971 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 CLDN6P56747 220 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 UBE2IP63279 158 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 RPE65Q16518 533 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 CAPRIN2Q6IMN6 1127 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 C3orf62Q6ZUJ4 267 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 SPNS2Q8IVW8 549 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 IFT20Q8IY31 132 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 Q8N9G6 341 aaPredicted RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 RMDN2Q96LZ7 410 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 OR52A5Q9H2C5 316 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 LRRC4CQ9HCJ2 640 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 SARS2Q9NP81 518 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 GALPQ9UBC7 116 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 MTRF1LQ9UGC7 380 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 PCDHB1Q9Y5F3 818 aa24.61■■□□□ 1.53
CPNE1-212ENST00000430570 CFAP20Q9Y6A4 193 aaKnown RBP24.61■■□□□ 1.53
CPNE1-212ENST00000430570 RHPN2P1A8MT19 583 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 F8W8V4 182 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 B4GAT1O43505 415 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 PIAS1O75925 651 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 AHSGP02765 367 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 ESR1P03372 595 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 HHEXQ03014 270 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 MGAT5Q09328 741 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 CUL1Q13616 776 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 BOP1Q14137 746 aaKnown RBP24.6■■□□□ 1.53
CPNE1-212ENST00000430570 ZNF438Q7Z4V0 828 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 SLC9B2Q86UD5 537 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 ADAMTS14Q8WXS8 1223 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 NFU1Q9UMS0 254 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 VPS9D1Q9Y2B5 631 aa24.6■■□□□ 1.53
CPNE1-212ENST00000430570 LIN7AO14910 233 aaPredicted RBP24.59■■□□□ 1.53
CPNE1-212ENST00000430570 TOP3BO95985 862 aaKnown RBP24.59■■□□□ 1.53
CPNE1-212ENST00000430570 PNLIPP16233 465 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 HALP42357 657 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 ABCG1P45844 678 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 BIRC2Q13490 618 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 UBAP2Q5T6F2 1119 aaKnown RBP24.59■■□□□ 1.53
CPNE1-212ENST00000430570 FAM136AQ96C01 138 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 C12orf66Q96MD2 445 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 PANX3Q96QZ0 392 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 FMO2Q99518 471 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 CDYLQ9Y232 598 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 MED16Q9Y2X0 877 aa24.59■■□□□ 1.53
CPNE1-212ENST00000430570 TCRBV9S1A1TA0A576 114 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 OPA1O60313 960 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 C1QAP02745 245 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 SLC35G4P0C7Q5 338 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 AOAHP28039 575 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 OR1D5P58170 312 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 CCL7P80098 99 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 E2F1Q01094 437 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 INSM1Q01101 510 aaPredicted RBP24.58■■□□□ 1.52
CPNE1-212ENST00000430570 RPA4Q13156 261 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 NR1D2Q14995 579 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 DUS1LQ6P1R4 473 aaKnown RBP24.58■■□□□ 1.52
CPNE1-212ENST00000430570 KIAA0408Q6ZU52 694 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 VRK3Q8IV63 474 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 CHCHD4Q8N4Q1 142 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 TSSK1BQ9BXA7 367 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 IMP3Q9NV31 184 aaKnown RBP24.58■■□□□ 1.52
CPNE1-212ENST00000430570 PSAT1Q9Y617 370 aa24.58■■□□□ 1.52
CPNE1-212ENST00000430570 SPTBN2O15020 2390 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 A0A1W2PQM1 296 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 CXorf49A8MYA2 514 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-212ENST00000430570 GPC4O75487 556 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 SLU7O95391 586 aaKnown RBP24.57■■□□□ 1.52
CPNE1-212ENST00000430570 VIPP01282 170 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 GSTA2P09210 222 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 CHRM3P20309 590 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 HSPA14Q0VDF9 509 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 KYNUQ16719 465 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 SPRED1Q7Z699 444 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 RAB44Q7Z6P3 723 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-212ENST00000430570 TRIM48Q8IWZ4 208 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 GABPB2Q8TAK5 448 aaPredicted RBP24.57■■□□□ 1.52
CPNE1-212ENST00000430570 CXorf40BQ96DE9 158 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 AARSD1Q9BTE6 412 aaKnown RBP24.57■■□□□ 1.52
CPNE1-212ENST00000430570 NINJ2Q9NZG7 142 aa24.57■■□□□ 1.52
CPNE1-212ENST00000430570 H3BMM5 538 aa24.56■■□□□ 1.52
CPNE1-212ENST00000430570 MTHFD1P11586 935 aaKnown RBP24.56■■□□□ 1.52
CPNE1-212ENST00000430570 ALDH4A1P30038 563 aa24.56■■□□□ 1.52
CPNE1-212ENST00000430570 FOXC1Q12948 553 aa24.56■■□□□ 1.52
CPNE1-212ENST00000430570 SYTL3Q4VX76 610 aa24.56■■□□□ 1.52
CPNE1-212ENST00000430570 RBM20Q5T481 1227 aaKnown RBP24.56■■□□□ 1.52
CPNE1-212ENST00000430570 CYS1Q717R9 158 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms