RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GALNT6Q8NCL4 622 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 GPR150Q8NGU9 434 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 SLC41A2Q96JW4 573 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 PPP1R2P1Q96PQ5 205 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 OR6C1Q96RD1 312 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 EFHD1Q9BUP0 239 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 TLR10Q9BXR5 811 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 KCNF1Q9H3M0 494 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 TRABDQ9H4I3 376 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 POT1Q9NUX5 634 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
VRK3-203ENST00000424804 CROTQ9UKG9 612 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 ARL5AQ9Y689 179 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 KCNMB2Q9Y691 235 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 SEC16AO15027 2179 aa12.7□□□□□ -0.38
VRK3-203ENST00000424804 IGHV5-51A0A0C4DH38 117 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 GLYATL1P3A0A0U1RQE8 302 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 C2orf81A6NN90 581 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 PDZK1P1A8MUH7 402 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 SGTAO43765 313 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 SPAG6O75602 509 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 KIAA0754O94854 1291 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 ETS1P14921 441 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 AMD1P17707 334 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 NELFEP18615 380 aaKnown RBP12.69□□□□□ -0.38
VRK3-203ENST00000424804 IDSP22304 550 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 TERF1P54274 439 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 FOXM1Q08050 763 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 MSLNQ13421 630 aaPredicted RBP12.69□□□□□ -0.38
VRK3-203ENST00000424804 IL11RAQ14626 422 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 RPE65Q16518 533 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 P3H1Q32P28 736 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 C16orf46Q6P387 395 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 C6orf15Q6UXA7 325 aaPredicted RBP12.69□□□□□ -0.38
VRK3-203ENST00000424804 CERS6Q6ZMG9 384 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 GSTA5Q7RTV2 222 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 OR4K2Q8NGD2 314 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 APOBEC4Q8WW27 367 aaKnown RBP12.69□□□□□ -0.38
VRK3-203ENST00000424804 KIAA1143Q96AT1 154 aaPredicted RBP12.69□□□□□ -0.38
VRK3-203ENST00000424804 TTC25Q96NG3 672 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 ULBP3Q9BZM4 244 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 ZMYND15Q9H091 742 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 ANAPC2Q9UJX6 822 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 PCDHGA6Q9Y5G7 932 aa12.69□□□□□ -0.38
VRK3-203ENST00000424804 TNRC6AQ8NDV7 1962 aaKnown RBP12.69□□□□□ -0.38
VRK3-203ENST00000424804 CCDC78A2IDD5 438 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 POP7O75817 140 aaKnown RBP12.68□□□□□ -0.38
VRK3-203ENST00000424804 FOLR1P15328 257 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 TPH1P17752 444 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 TCN2P20062 427 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 NR1D1P20393 614 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 LPOP22079 712 aaPredicted RBP12.68□□□□□ -0.38
VRK3-203ENST00000424804 ADRA1AP35348 466 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 DLSTP36957 453 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 GTF2H3Q13889 308 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 KCTD19Q17RG1 926 aaPredicted RBP12.68□□□□□ -0.38
VRK3-203ENST00000424804 CACHD1Q5VU97 1274 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 RANBP10Q6VN20 620 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 PPP1R21Q6ZMI0 780 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 RBM12BQ8IXT5 1001 aaKnown RBP12.68□□□□□ -0.38
VRK3-203ENST00000424804 SLC35F6Q8N357 371 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 DDHD1Q8NEL9 900 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 C9orf43Q8TAL5 461 aaPredicted RBP12.68□□□□□ -0.38
VRK3-203ENST00000424804 UBE2Q2Q8WVN8 375 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 MAIP1Q8WWC4 291 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 RUFY1Q96T51 708 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 FRMD8P1Q9BZ68 369 aaPredicted RBP12.68□□□□□ -0.38
VRK3-203ENST00000424804 LRRC40Q9H9A6 602 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.68□□□□□ -0.38
VRK3-203ENST00000424804 KCTD3Q9Y597 815 aa12.68□□□□□ -0.38
VRK3-203ENST00000424804 UTP20O75691 2785 aaKnown RBP12.67□□□□□ -0.38
VRK3-203ENST00000424804 CCL22O00626 93 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 PSMD3O43242 534 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 KIF5CO60282 957 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 KCNJ13O60928 360 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 CRTAMO95727 393 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 RECKO95980 971 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 PDGFAP04085 211 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 AKT1P31749 480 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 STIP1P31948 543 aaKnown RBP12.67□□□□□ -0.38
VRK3-203ENST00000424804 KCNJ1P48048 391 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 MC1RQ01726 317 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 NFE2L1Q14494 772 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 KCNAB1Q14722 419 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 POU6F1Q14863 301 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 TAF1AQ15573 450 aaPredicted RBP12.67□□□□□ -0.38
VRK3-203ENST00000424804 OASLQ15646 514 aaKnown RBP12.67□□□□□ -0.38
VRK3-203ENST00000424804 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.67□□□□□ -0.38
VRK3-203ENST00000424804 GPRC6AQ5T6X5 926 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 ZDHHC20Q5W0Z9 365 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 METRNLQ641Q3 311 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 PWWP2BQ6NUJ5 590 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 TMEM220Q6QAJ8 160 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 TRAPPC5Q8IUR0 188 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 TRIM48Q8IWZ4 208 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 REXO1L1PQ8IX06 675 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 DNAAF3Q8N9W5 541 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 OR13C4Q8NGS5 318 aa12.67□□□□□ -0.38
VRK3-203ENST00000424804 BRSK1Q8TDC3 778 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms