RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 GPR18Q14330 331 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 KCNJ11Q14654 390 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 C16orf72Q14CZ0 275 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 ARMC3Q5W041 872 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 CASC4Q6P4E1 433 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 PACS1Q6VY07 963 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 ZNF574Q6ZN55 896 aaPredicted RBP10.71□□□□□ -0.69
USP49-204ENST00000423567 TMPRSS9Q7Z410 1059 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 PIANPQ8IYJ0 282 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 RCBTB1Q8NDN9 531 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 NAT14Q8WUY8 206 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 KCNE4Q8WWG9 221 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 CAPZA3Q96KX2 299 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 C12orf66Q96MD2 445 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 RUNDC3BQ96NL0 473 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 WWP1Q9H0M0 922 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 COG4Q9H9E3 785 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 MRM3Q9HC36 420 aaKnown RBP10.71□□□□□ -0.69
USP49-204ENST00000423567 SLC40A1Q9NP59 571 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 ASCL3Q9NQ33 180 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 CATSPERZQ9NTU4 200 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 KLHL3Q9UH77 587 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 PCDHGA7Q9Y5G6 932 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 SAR1BQ9Y6B6 198 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 COLEC10Q9Y6Z7 277 aa10.71□□□□□ -0.69
USP49-204ENST00000423567 FRYQ5TBA9 3013 aa10.71□□□□□ -0.7
USP49-204ENST00000423567 ARHGEF17Q96PE2 2063 aaPredicted RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 PMS2P1A4D2B8 440 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 A8MU76 341 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 CDRT15L2A8MXV6 281 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 LIN7AO14910 233 aaPredicted RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 CD3EAPO15446 510 aaKnown RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 SGTAO43765 313 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 MLNP12872 115 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 TYRP1P17643 537 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 PAMP19021 973 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 PAFAH1B1P43034 410 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 CAPZBP47756 277 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 TTPAP49638 278 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 CRADDP78560 199 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 PLOD1Q02809 727 aaPredicted RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 CFHR1Q03591 330 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 RPA4Q13156 261 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 SYTL3Q4VX76 610 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 BROXQ5VW32 411 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 PAPD7Q5XG87 772 aaKnown RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 SDCCAG8Q86SQ7 713 aaPredicted RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 CLEC14AQ86T13 490 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 FAM129CQ86XR2 697 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 MPP5Q8N3R9 675 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 CLDN19Q8N6F1 224 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 MCUQ8NE86 351 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 HNRNPLLQ8WVV9 542 aaKnown RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 ZFPM2Q8WW38 1151 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 CPT1BQ92523 772 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 ELMO1Q92556 727 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 ZDHHC12Q96GR4 267 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 PRR11Q96HE9 360 aaPredicted RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 NAF1Q96HR8 494 aaKnown RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 SGSM3Q96HU1 749 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 ZNF778Q96MU6 729 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 INSM2Q96T92 566 aaPredicted RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 KIFC1Q9BW19 673 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 DDX47Q9H0S4 455 aaKnown RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 SYBUQ9NX95 663 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 TMEM9Q9P0T7 183 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 PDP2Q9P2J9 529 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 ASIC3Q9UHC3 531 aa10.7□□□□□ -0.7
USP49-204ENST00000423567 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 CFAP20Q9Y6A4 193 aaKnown RBP10.7□□□□□ -0.7
USP49-204ENST00000423567 MN1Q10571 1320 aaPredicted RBP10.69□□□□□ -0.7
USP49-204ENST00000423567 MYLKQ15746 1914 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 TCRBV7S3A2A0A539 114 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 MAGEB16A2A368 324 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 SDR42E2A6NKP2 422 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 NVLO15381 856 aaKnown RBP10.69□□□□□ -0.7
USP49-204ENST00000423567 TOX3O15405 576 aaPredicted RBP10.69□□□□□ -0.7
USP49-204ENST00000423567 NDUFS3O75489 264 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 RASSF9O75901 435 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 ITIH1P19827 911 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 CD82P27701 267 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 NMBRP28336 390 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 SLC5A2P31639 672 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 CD151P48509 253 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 RAB15P59190 212 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 ANKRD22Q5VYY1 191 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 MRNIPQ6NTE8 343 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 ARMC6Q6NXE6 501 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 IRGCQ6NXR0 463 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 C19orf48Q6RUI8 117 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 ZNF534Q76KX8 674 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 PCGF5Q86SE9 256 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 PPIL6Q8IXY8 311 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 GPR150Q8NGU9 434 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 USP7Q93009 1102 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 RMDN2Q96LZ7 410 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 TGM7Q96PF1 710 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 TAAR9Q96RI9 348 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 FERD3LQ96RJ6 166 aa10.69□□□□□ -0.7
USP49-204ENST00000423567 ASPSCR1Q9BZE9 553 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms