RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 NACAP1Q9BZK3 213 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM129AQ9BZQ8 928 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 STMN4Q9H169 189 aaPredicted RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ECT2Q9H8V3 914 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SAMSN1Q9NSI8 373 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PANK4Q9NVE7 773 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAIMQ9NVQ4 179 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 TMEM160Q9NX00 188 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 EURLQ9NYK6 297 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CYP39A1Q9NYL5 469 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 C6orf203Q9P0P8 240 aaPredicted RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 THEGQ9P2T0 379 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 RABL2AQ9UBK7 228 aaPredicted RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PEMTQ9UBM1 199 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC12A6Q9UHW9 1150 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 HSF4Q9ULV5 492 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CHMP2BQ9UQN3 213 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PRELID1Q9Y255 219 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 N6AMT1Q9Y5N5 214 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 KNDC1Q76NI1 1749 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ADGRB3O60242 1522 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 GPATCH8Q9UKJ3 1502 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZMYM6O95789 1325 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PLEKHG1Q9ULL1 1385 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 IQGAP3Q86VI3 1631 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RIMS2Q9UQ26 1411 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CDC42BPBQ9Y5S2 1711 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 A0A0J9YVX5 310 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 BICDL2A1A5D9 508 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CLEC18AA5D8T8 446 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 BTBD18B2RXH4 712 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 HOXC11O43248 304 aaPredicted RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 PDE5AO76074 875 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 HSPA8P11142 646 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZNF18P17022 549 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 TMOD1P28289 359 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 HOXD10P28358 340 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 FMO4P31512 558 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 HPDP32754 393 aaPredicted RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CYLC1P35663 651 aaPredicted RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RPL3P39023 403 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 MATR3P43243 847 aaKnown RBP eCLIP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 SYKP43405 635 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RFX5P48382 616 aaPredicted RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 NR1H2P55055 460 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ADARP55265 1226 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RPL26P61254 145 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RPP30P78346 268 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ABATP80404 500 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 EFNB1P98172 346 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CYP4A11Q02928 519 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CEBPZQ03701 1054 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 DMPKQ09013 629 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 DCTN2Q13561 401 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CUL1Q13616 776 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 EIF4A2Q14240 407 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RCN2Q14257 317 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 HNF4GQ14541 408 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ARHGEF6Q15052 776 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCDC6Q16204 474 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 HIST2H2ACQ16777 129 aaPredicted RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCDC14Q49A88 953 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 LIN52Q52LA3 116 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ODF2Q5BJF6 829 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZNF766Q5HY98 468 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 KCTD16Q68DU8 428 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 TYW3Q6IPR3 259 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 NEPROQ6NW34 567 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RAD9BQ6WBX8 426 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 MARK2Q7KZI7 788 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 PIGWQ7Z7B1 504 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 SPATA24Q86W54 205 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 NECAB1Q8N987 351 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CLEC18CQ8NCF0 446 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ACMSDQ8TDX5 336 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 TRIB2Q92519 343 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 RAPGEF5Q92565 580 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 TAF4BQ92750 862 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ABTB1Q969K4 478 aaPredicted RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 TXNDC15Q96J42 360 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 EPSTI1Q96J88 318 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCDC42Q96M95 316 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 TMEM237Q96Q45 408 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 XPO6Q96QU8 1125 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 USP28Q96RU2 1077 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CLSTN3Q9BQT9 956 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC39A3Q9BRY0 314 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 MSTO1Q9BUK6 570 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 DCLRE1BQ9H816 532 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 CLK4Q9HAZ1 481 aaKnown RBP3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 HOXC10Q9NYD6 342 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 ADAM22Q9P0K1 906 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 SEPT10Q9P0V9 454 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 KIAA1456Q9P272 454 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 NDRG3Q9UGV2 375 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 GTF2A1LQ9UNN4 478 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC45A1Q9Y2W3 748 aa3.37□□□□□ -1.87
SDCBPP3-201ENST00000419629 NFE2L3Q9Y4A8 694 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms