RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 SCN10AQ9Y5Y9 1956 aa11.72□□□□□ -0.53
LIMK1-202ENST00000418310 C2orf78A6NCI8 922 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 SLC38A8A6NNN8 435 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 VNN2O95498 520 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 PENKP01210 267 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-202ENST00000418310 S100BP04271 92 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-202ENST00000418310 MAPKAPK2P49137 400 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 SLC11A1P49279 550 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 CHRNB3Q05901 458 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 DSC1Q08554 894 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 GTF2H2Q13888 395 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 PHKG1Q16816 387 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 GTF2H2CQ6P1K8 395 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 DUS3LQ96G46 650 aaKnown RBP11.71□□□□□ -0.53
LIMK1-202ENST00000418310 OSBPL6Q9BZF3 934 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 ACTL8Q9H568 366 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 C1orf232A0A0U1RR37 186 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 FAM155AB1AL88 458 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-202ENST00000418310 TOR1BO14657 336 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 HS6ST1O60243 411 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 SEC22BO75396 215 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 DIRAS1O95057 198 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 CST1P01037 141 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 AGXTP21549 392 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 OR1D2P34982 312 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 CA8P35219 290 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 GSSP48637 474 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 TTPAP49638 278 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 ARSFP54793 590 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 TUBA4AP68366 448 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 ARHGEF7Q14155 803 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 NKG7Q16617 165 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 AASDHQ4L235 1098 aaPredicted RBP11.71□□□□□ -0.53
LIMK1-202ENST00000418310 FUT10Q6P4F1 479 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
LIMK1-202ENST00000418310 HID1Q8IV36 788 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 GIPC3Q8TF64 312 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 ULK4Q96C45 1275 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 EID2BQ96D98 161 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 TOR3AQ9H497 397 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 OLA1Q9NTK5 396 aaKnown RBP11.71□□□□□ -0.53
LIMK1-202ENST00000418310 ADGRE2Q9UHX3 823 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 PRSS21Q9Y6M0 314 aa11.71□□□□□ -0.53
LIMK1-202ENST00000418310 PTPRDP23468 1912 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 FAM234BA2RU67 622 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 COCHO43405 550 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 XYLBO75191 536 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 C1QCP02747 245 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 NEK2P51955 445 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 XKR7Q5GH72 579 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 C16orf87Q6PH81 154 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 SPRED1Q7Z699 444 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 ZFAND4Q86XD8 727 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 RNF175Q8N4F7 328 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 DBF4BQ8NFT6 615 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 OR2T12Q8NG77 320 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 OSCP1Q8WVF1 389 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 PYCR2Q96C36 320 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 CCDC138Q96M89 665 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 MYOCQ99972 504 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 ASB8Q9H765 288 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 DNMT3LQ9UJW3 386 aa11.71□□□□□ -0.54
LIMK1-202ENST00000418310 GOLGA4Q13439 2230 aaKnown RBP11.71□□□□□ -0.54
LIMK1-202ENST00000418310 FFAR2O15552 330 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 NBNO60934 754 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 SLC25A14O95258 325 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-202ENST00000418310 PRAMEF1O95521 474 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ALDH2P05091 517 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 FCGR1AP12314 374 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 PIGAP37287 484 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 NUP107P57740 925 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ARF5P84085 180 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 GALNT7Q86SF2 657 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 LIX1Q8N485 282 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 SDCCAG3Q96C92 435 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 TSSK3Q96PN8 268 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 RNF38Q9H0F5 515 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 MAGEH1Q9H213 219 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 TNKS2Q9H2K2 1166 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ARMC7Q9H6L4 198 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 NTN4Q9HB63 628 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 OR7A17O14581 309 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 PRKD3O94806 890 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 EPOP01588 193 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ANXA6P08133 673 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 MYCLP1P12525 358 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-202ENST00000418310 FAM117BQ6P1L5 589 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ELMSAN1Q6PJG2 1045 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 DLEU7Q6UYE1 221 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 DET1Q7L5Y6 550 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 R3HCC1LQ7Z5L2 792 aaKnown RBP11.7□□□□□ -0.54
LIMK1-202ENST00000418310 SERPINA9Q86WD7 417 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 SNX29P2Q8IUI4 249 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 CLPBQ9H078 707 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 SLC6A13Q9NSD5 602 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 ELOVL2Q9NXB9 296 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 TBL1XO60907 577 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 VPS4BO75351 444 aa11.7□□□□□ -0.54
LIMK1-202ENST00000418310 DEAF1O75398 565 aaPredicted RBP11.7□□□□□ -0.54
LIMK1-202ENST00000418310 THRBP10828 461 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms