RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZIC5Q96T25 663 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 MTERF1Q99551 399 aaKnown RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 TIMMDC1Q9NPL8 285 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF490Q9ULM2 529 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 COL1A2P08123 1366 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SAP18O00422 153 aaKnown RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 THRBP10828 461 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 MZF1P28698 734 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 PIGAP37287 484 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CLK1P49759 484 aaKnown RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SCAPQ12770 1279 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 PPP4R4Q6NUP7 873 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 TAF2Q6P1X5 1199 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 TMEM53Q6P2H8 277 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 NEK10Q6ZWH5 1172 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SLCO6A1Q86UG4 719 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 C8orf59Q8N0T1 100 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 CACTIN-AS1Q8N1I8 211 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SFRP1Q8N474 314 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 MED8Q96G25 268 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 AARSD1Q9BTE6 412 aaKnown RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 NPLQ9BXD5 320 aaPredicted RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 SMG9Q9H0W8 520 aaKnown RBP13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 ARL15Q9NXU5 204 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 WDR81Q562E7 1941 aa13.01□□□□□ -0.33
TNFRSF8-203ENST00000417814 FER1L6Q2WGJ9 1857 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 TMEM221A6NGB7 291 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 SERPINA1P01009 418 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 UBE3AQ05086 875 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 KCNAB2Q13303 367 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 CDH18Q13634 790 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 GRB14Q14449 540 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 AHSA2Q719I0 299 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 FUBP1Q96AE4 644 aaKnown RBP13□□□□□ -0.33
TNFRSF8-203ENST00000417814 IKZF5Q9H5V7 419 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 TCRBV3S1A0A5B6 114 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 ADAM12O43184 909 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF865P0CJ78 1059 aaPredicted RBP13□□□□□ -0.33
TNFRSF8-203ENST00000417814 HOXD12P35452 270 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 PPP3CCP48454 512 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 STC1P52823 247 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZBED5Q49AG3 693 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 BRMS1LQ5PSV4 323 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 MSANTD2Q6P1R3 559 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 LRRC8DQ7L1W4 858 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 TAS1R1Q7RTX1 841 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 PAGE2Q7Z2X7 111 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 CENPSQ8N2Z9 138 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 TTC30BQ8N4P2 665 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 ARRDC2Q8TBH0 407 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 C17orf50Q8WW18 174 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 SELENOMQ8WWX9 145 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 RPL3LQ92901 407 aaKnown RBP13□□□□□ -0.33
TNFRSF8-203ENST00000417814 TMEM125Q96AQ2 219 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 UBXN10Q96LJ8 280 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 HOPXQ9BPY8 73 aaPredicted RBP13□□□□□ -0.33
TNFRSF8-203ENST00000417814 SH3BP4Q9P0V3 963 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 GTF2IRD1Q9UHL9 959 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 A0A1W2PP18 115 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 RHOQP17081 205 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 HCAR3P49019 387 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 HK3P52790 923 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 SLC13A2Q13183 592 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 GPR153Q6NV75 609 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 BLOC1S3Q6QNY0 202 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 VTCN1Q7Z7D3 282 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 GPR180Q86V85 440 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 ADGRG2Q8IZP9 1017 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 SMYD1Q8NB12 490 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 FNDC8Q8TC99 324 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 BRSK1Q8TDC3 778 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 GPATCH1Q9BRR8 931 aaKnown RBP13□□□□□ -0.33
TNFRSF8-203ENST00000417814 MFSD1Q9H3U5 465 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 CD300AQ9UGN4 299 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 PCDHGA8Q9Y5G5 932 aa13□□□□□ -0.33
TNFRSF8-203ENST00000417814 LOC730098B7Z3J9 87 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ULK1O75385 1050 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 CLDN7O95471 211 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 DLGAP3O95886 979 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 MMP2P08253 660 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 MBL2P11226 248 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 HERC3Q15034 1050 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 PHKG1Q16816 387 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 AASDHQ4L235 1098 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 TMEM173Q86WV6 379 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ZNF540Q8NDQ6 660 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 SPPL2AQ8TCT8 520 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 WBP2Q969T9 261 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 SLC47A1Q96FL8 570 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 BARD1Q99728 777 aaKnown RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ACTR3BQ9P1U1 418 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 OAS3Q9Y6K5 1087 aaKnown RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 WDR87Q6ZQQ6 2873 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 TBKBP1A7MCY6 615 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 TBL1XO60907 577 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 ANXA6P08133 673 aa12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 LPOP22079 712 aaPredicted RBP12.99□□□□□ -0.33
TNFRSF8-203ENST00000417814 CORO1AP31146 461 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms