RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 AFF3P51826 1226 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 PGGT1BP53609 377 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 SRP54P61011 504 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 IRX4P78413 519 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 SRSF5Q13243 272 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 ACAP2Q15057 778 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 PLK5Q496M5 336 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 PYCR3Q53H96 274 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 ACSBG2Q5FVE4 666 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 C16orf46Q6P387 395 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 LVRNQ6Q4G3 990 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 NEK10Q6ZWH5 1172 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 RABEPKQ7Z6M1 372 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 ADAMTSL2Q86TH1 951 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 PARGQ86W56 976 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 PLD6Q8N2A8 252 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 OXR1Q8N573 874 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 GIMAP7Q8NHV1 300 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 DNASE2BQ8WZ79 361 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 EXT2Q93063 718 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 TSACCQ96A04 125 aaPredicted RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 PDXPQ96GD0 296 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 HIST1H2AHQ96KK5 128 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 FAM111AQ96PZ2 611 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 HIST1H2AJQ99878 128 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 MRPL57Q9BQC6 102 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 ORAI3Q9BRQ5 295 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 H2AFJQ9BTM1 129 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 C1QTNF1Q9BXJ1 281 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 GSDMCQ9BYG8 508 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 TRIM54Q9BYV2 358 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 MRPL46Q9H2W6 279 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 TFB2MQ9H5Q4 396 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 FGF22Q9HCT0 170 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 MRPL40Q9NQ50 206 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 INTS9Q9NV88 658 aaKnown RBP8.25□□□□□ -1.09
RBM39-208ENST00000416108 ACSL5Q9ULC5 683 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 MED16Q9Y2X0 877 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 PRKAB1Q9Y478 270 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 PCDHGA2Q9Y5H1 932 aa8.25□□□□□ -1.09
RBM39-208ENST00000416108 SPTY2D1-AS1A0A0U1RR47 76 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 A0A1W2PR77 199 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SLC5A10A0PJK1 596 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 NPEPPSL1A6NEC2 478 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 PDZK1P1A8MUH7 402 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SUPT3HB4E1H0 165 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 VILLO15195 856 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 POLR3GO15318 223 aaPredicted RBP8.24□□□□□ -1.09
RBM39-208ENST00000416108 HRO43593 1189 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 TYROBPO43914 113 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SNX2O60749 519 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 GPR37L1O60883 481 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 LILRB5O75023 590 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SMIM24O75264 130 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SUPT3HO75486 399 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 CATP04040 527 aaKnown RBP8.24□□□□□ -1.09
RBM39-208ENST00000416108 RPN2P04844 631 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 C8GP07360 202 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SLC35G4P0C7Q5 338 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 MYL2P10916 166 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 CHN1P15882 459 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 CYP2A7P20853 494 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 ITPKAP23677 461 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 MAP4P27816 1152 aaKnown RBP8.24□□□□□ -1.09
RBM39-208ENST00000416108 RPA3P35244 121 aaPredicted RBP8.24□□□□□ -1.09
RBM39-208ENST00000416108 HALP42357 657 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 PREPP48147 710 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 CSRP3P50461 194 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SLC18A1P54219 525 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 IL9RQ01113 521 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 DMPKQ09013 629 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 ASPHQ12797 758 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 ILF3Q12906 894 aaKnown RBP eCLIP8.24□□□□□ -1.091e-8■■■■□ 22.3
RBM39-208ENST00000416108 RPA4Q13156 261 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SP140Q13342 867 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 LRP8Q14114 963 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 NFE2L1Q14494 772 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 ALG11Q2TAA5 492 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 TECRLQ5HYJ1 363 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 TTC23LQ6PF05 361 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 TMEM207Q6UWW9 146 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 NAPRTQ6XQN6 538 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 SH2D5Q6ZV89 423 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 RAB44Q7Z6P3 723 aaPredicted RBP8.24□□□□□ -1.09
RBM39-208ENST00000416108 CLEC14AQ86T13 490 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 TRIM42Q8IWZ5 723 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 PHACTR4Q8IZ21 702 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 CENPLQ8N0S6 344 aaPredicted RBP8.24□□□□□ -1.09
RBM39-208ENST00000416108 FSTL5Q8N475 847 aaPredicted RBP8.24□□□□□ -1.09
RBM39-208ENST00000416108 SPATA6LQ8N4H0 392 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 ARMC2Q8NEN0 867 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 CFAP61Q8NHU2 1237 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 PPP1R14CQ8TAE6 165 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 STAG3L4Q8TBR4 150 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 RDH11Q8TC12 318 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 EEF1AKMT1Q8WVE0 214 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 ANKRD49Q8WVL7 239 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 OR1E3Q8WZA6 343 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 PIGKQ92643 395 aa8.24□□□□□ -1.09
RBM39-208ENST00000416108 PDLIM5Q96HC4 596 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms