RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SLC10A7Q0GE19 358 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 LCP2Q13094 533 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 IL18Q14116 193 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 TARBP2Q15633 366 aaKnown RBP12.73□□□□□ -0.37
SCN1B-202ENST00000415950 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 C9orf131Q5VYM1 1079 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 DCLRE1AQ6PJP8 1040 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 SLC16A10Q8TF71 515 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ISOC1Q96CN7 298 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 SP140LQ9H930 580 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 NMUR1Q9HB89 426 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ZNF221Q9UK13 617 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 LTBP4Q8N2S1 1624 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ELOVL7A1L3X0 281 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 CCDC162PA2VCL2 907 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 TBC1D3BA6NDS4 549 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 PRORSD1PA6NEY8 169 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 AIREO43918 545 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ALOX5P09917 674 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 AXLP30530 894 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 CD52P31358 61 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 TSTD2Q5T7W7 516 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 OR8H1Q8NGG4 311 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 TMBIM1Q969X1 311 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 NSUN5Q96P11 429 aaKnown RBP12.73□□□□□ -0.37
SCN1B-202ENST00000415950 MAT2BQ9NZL9 334 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ASF1AQ9Y294 204 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ARID1AO14497 2285 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 FAM172BPA6NC97 362 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 PRMT5O14744 637 aaPredicted RBP12.73□□□□□ -0.37
SCN1B-202ENST00000415950 MANFP55145 182 aaKnown RBP12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ZBTB6Q15916 424 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 FNDC3BQ53EP0 1204 aaKnown RBP12.73□□□□□ -0.37
SCN1B-202ENST00000415950 RAET1GQ6H3X3 334 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 RAB43Q86YS6 212 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 ITFG2Q969R8 447 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 CDK5RAP1Q96SZ6 601 aaKnown RBP12.73□□□□□ -0.37
SCN1B-202ENST00000415950 LRTM1Q9HBL6 345 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 MBD2Q9UBB5 411 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 TRPV2Q9Y5S1 764 aa12.73□□□□□ -0.37
SCN1B-202ENST00000415950 AP3D1O14617 1153 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 B4GAT1O43505 415 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 NIPSNAP2O75323 286 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 KHDRBS3O75525 346 aaKnown RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 PRKD3O94806 890 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 SLC25A14O95258 325 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 IFNA16P05015 189 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 FGF1P05230 155 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 ACLYP53396 1101 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 ACAP2Q15057 778 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TGFBIQ15582 683 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 ITIH5Q86UX2 942 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 PARGQ86W56 976 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CRYBG2Q8N1P7 616 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TCAIMQ8N3R3 496 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 SIDT2Q8NBJ9 832 aaKnown RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 GTPBP3Q969Y2 492 aaKnown RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 HMCESQ96FZ2 354 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 NENFQ9UMX5 172 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TESMINQ9Y4I5 508 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 K7EPI3 171 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TRIM3O75382 744 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 HLA-DQB2P05538 268 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 GPIP06744 558 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 PSMA1P25786 263 aaKnown RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CPTPQ5TA50 214 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 DPY19L2P1Q6NXN4 242 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 UBE2R2Q712K3 238 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 COLGALT2Q8IYK4 626 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CHPFQ8IZ52 775 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 MEIOBQ8N635 442 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 PYCR2Q96C36 320 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 PPCDCQ96CD2 204 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 QRFPRQ96P65 431 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 KCNS3Q9BQ31 491 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TDRD1Q9BXT4 1180 aaKnown RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CTPS2Q9NRF8 586 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 A8MV72 311 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 E9PAM4 449 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CYP2A6P11509 494 aaPredicted RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 POLR2EP19388 210 aaKnown RBP12.72□□□□□ -0.37
SCN1B-202ENST00000415950 MYL9P24844 172 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 GDF5P43026 501 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 NDST2P52849 883 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TXNDC11Q6PKC3 985 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 C15orf39Q6ZRI6 1047 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 PSD4Q8NDX1 1056 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TRPV3Q8NET8 790 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 TEX47Q8TBZ9 253 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 ATL1Q8WXF7 558 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 S100A13Q99584 98 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 ATP13A3Q9H7F0 1226 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 BRD9Q9H8M2 597 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 GIN1Q9NXP7 522 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 ARFGEF2Q9Y6D5 1785 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 SMIM30A4D0T7 59 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 CDC7O00311 574 aa12.72□□□□□ -0.37
SCN1B-202ENST00000415950 AREL1O15033 823 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms