RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 CD68P34810 354 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 MAGEA6P43360 314 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 PPM1FP49593 454 aaPredicted RBP13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 SNAP47Q5SQN1 464 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 IZUMO3Q5VZ72 239 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 SLC6A19Q695T7 634 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 IQCKQ8N0W5 287 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 GLIS1Q8NBF1 620 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 LRRN4CLQ8ND94 238 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 MYRIPQ8NFW9 859 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 HCAR2Q8TDS4 363 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 VOPP1Q96AW1 172 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 TRIM31Q9BZY9 425 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 WDR26Q9H7D7 661 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 LRRC40Q9H9A6 602 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 LUZP4Q9P127 313 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 LHX3Q9UBR4 397 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 DMGDHQ9UI17 866 aaKnown RBP13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 MOSPD1Q9UJG1 213 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 SHOC2Q9UQ13 582 aa13.33□□□□□ -0.28
RAPGEF1-204ENST00000414781 DOCK4Q8N1I0 1966 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 C21orf140B9A014 251 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 PRSS44E7EML9 344 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 SEC31AO94979 1220 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 AP2A1O95782 977 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 TPSB2P20231 275 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 IVDP26440 423 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 PSMB4P28070 264 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 CD86P42081 329 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 RPL21P46778 160 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 MAXP61244 160 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 MRPS25P82663 173 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 DNASE1L3Q13609 305 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 TESK1Q15569 626 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 TPSAB1Q15661 275 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 ERCC6LQ2NKX8 1250 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 ERAP2Q6P179 960 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 PRUNE1Q86TP1 453 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 NRROSQ86YC3 692 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 NDUFAF2Q8N183 169 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 PGBD5Q8N414 524 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 MCUQ8NE86 351 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 ARRDC2Q8TBH0 407 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 IFT81Q8WYA0 676 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 SNRNP40Q96DI7 357 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 ZNF641Q96N77 438 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 FSD1LQ9BXM9 530 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 ADGRE3Q9BY15 652 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 DPH5Q9H2P9 285 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 ATP13A3Q9H7F0 1226 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 CARS2Q9HA77 564 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 NOD2Q9HC29 1040 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 MTRF1LQ9UGC7 380 aaKnown RBP13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 ACTL7AQ9Y615 435 aa13.32□□□□□ -0.28
RAPGEF1-204ENST00000414781 SVILO95425 2214 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 A8MU76 341 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 SOCS5O75159 536 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 SUN1O94901 812 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 MT-ND3P03897 115 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 SERPINA4P29622 427 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 TRIM23P36406 574 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 FASLGP48023 281 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 LIG3P49916 1009 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 ITGA1P56199 1179 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 RPL26P61254 145 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 POLR2LP62875 67 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 DSC2Q02487 901 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 BCL2L1Q07817 233 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 NIPAL4Q0D2K0 466 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 UGT8Q16880 541 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 RNASEH2BQ5TBB1 312 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 HIBCHQ6NVY1 386 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 WDR93Q6P2C0 686 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 KLHDC8BQ8IXV7 354 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 NAGSQ8N159 534 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 PAF1Q8N7H5 531 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 PLA2G15Q8NCC3 412 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 GALNT6Q8NCL4 622 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 CPT1BQ92523 772 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 TADA1Q96BN2 335 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 C19orf60Q96EN9 201 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 SRPK1Q96SB4 655 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 SLC38A3Q99624 504 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 ING2Q9H160 280 aa13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 XAB2Q9HCS7 855 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 RPL26L1Q9UNX3 145 aaKnown RBP13.31□□□□□ -0.28
RAPGEF1-204ENST00000414781 NIPBLQ6KC79 2804 aaeCLIP13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 BHMG1C9JSJ3 638 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 CTIFO43310 598 aaKnown RBP13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 DIAPH2O60879 1101 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 PMPCBO75439 489 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 CEACAM4O75871 244 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 ANKRD34CP0C6C1 535 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 MLNP12872 115 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 CCL11P51671 97 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 ITGA8P53708 1063 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 TERF1P54274 439 aa13.3□□□□□ -0.28
RAPGEF1-204ENST00000414781 PLTPP55058 493 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms