RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 ADAMTSL4Q6UY14 1074 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 MACC1Q6ZN28 852 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 ADGRG6Q86SQ4 1221 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 CLEC14AQ86T13 490 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 CD200R1Q8TD46 325 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 ACMSDQ8TDX5 336 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 KCNJ9Q92806 393 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 DCUN1D1Q96GG9 259 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 COX14Q96I36 57 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 HIC2Q96JB3 615 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 OR2AG1Q9H205 316 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 TAS2R13Q9NYV9 303 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 ATXN10Q9UBB4 475 aa15.28■□□□□ 0.04
SHMT2-202ENST00000414700 A0A1B0GVG6 124 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 E5RI56 91 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 PRPF4O43172 522 aaKnown RBP eCLIP15.27■□□□□ 0.041e-8■■■□□ 17.5
SHMT2-202ENST00000414700 ZNF37AP17032 561 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-202ENST00000414700 POLD2P49005 469 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 PDAP1Q13442 181 aaKnown RBP15.27■□□□□ 0.04
SHMT2-202ENST00000414700 CSHL1Q14406 222 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 DOK6Q6PKX4 331 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 UBXN10Q96LJ8 280 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 WDR26Q9H7D7 661 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 CHCHD3Q9NX63 227 aaKnown RBP15.27■□□□□ 0.04
SHMT2-202ENST00000414700 KCTD5Q9NXV2 234 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 TMEM216Q9P0N5 145 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 PDP2Q9P2J9 529 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 TLK1Q9UKI8 766 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 EMCNQ9ULC0 261 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 ACOT9Q9Y305 439 aa15.27■□□□□ 0.04
SHMT2-202ENST00000414700 MAGEA13PA6NCF6 341 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 TMEM202A6NGA9 273 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 ENTPD5O75356 428 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 CDK14O94921 469 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 MPOP05164 745 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 CCDC166P0CW27 439 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 T-ENOLP0DO92 83 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 CRABP2P29373 138 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 GLRBP48167 497 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 CCDC6Q16204 474 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 KIAA0895LQ68EN5 471 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 FAM47EQ6ZV65 393 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 TMEM105Q8N8V8 129 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 PHC3Q8NDX5 983 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 ALKBH8Q96BT7 664 aaKnown RBP15.27■□□□□ 0.03
SHMT2-202ENST00000414700 NXNL1Q96CM4 212 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 FAM111AQ96PZ2 611 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 PAIP2Q9BPZ3 127 aaKnown RBP15.27■□□□□ 0.03
SHMT2-202ENST00000414700 TEX101Q9BY14 249 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 LNPEPQ9UIQ6 1025 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 TSR3Q9UJK0 312 aaKnown RBP15.27■□□□□ 0.03
SHMT2-202ENST00000414700 PRKAB1Q9Y478 270 aa15.27■□□□□ 0.03
SHMT2-202ENST00000414700 AXIN1O15169 862 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 VPS26AO75436 327 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 ASMTLO95671 621 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 ZNF8P17098 575 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 PTPN4P29074 926 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 OXTRP30559 389 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 CCR7P32248 378 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 CRHR1P34998 444 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 WDR4P57081 412 aaKnown RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 IRX4P78413 519 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 TAF1BQ53T94 588 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 DENND1AQ8TEH3 1009 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 TSPAN17Q96FV3 270 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 BMFQ96LC9 184 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 GPR78Q96P69 363 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 GBP5Q96PP8 586 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 TRIM39Q9HCM9 518 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 SSU72Q9NP77 194 aaKnown RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 MKS1Q9NXB0 559 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 FAM8A1Q9UBU6 413 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 GRID1Q9ULK0 1009 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 COMMD10Q9Y6G5 202 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 CFAP99D6REC4 459 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 H3BMM5 538 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 FUCA1P04066 466 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 RALBP11234 206 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 BCKDHBP21953 392 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 HNRNPA2B1P22626 353 aaKnown RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 TPRG1LQ5T0D9 272 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 N4BP2L1Q5TBK1 243 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 TMEM220Q6QAJ8 160 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 MAMSTRQ6ZN01 415 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 RGS9BPQ6ZS82 235 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 ZNF547Q8IVP9 402 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 CPNE9Q8IYJ1 553 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 HEXDCQ8WVB3 486 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 ASB12Q8WXK4 309 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 FOXJ1Q92949 421 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 C1QTNF7Q9BXJ2 289 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 IGSF5Q9NSI5 407 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 GULP1Q9UBP9 304 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 SMG5Q9UPR3 1016 aaKnown RBP15.26■□□□□ 0.03
SHMT2-202ENST00000414700 PLLPQ9Y342 182 aa15.26■□□□□ 0.03
SHMT2-202ENST00000414700 THADAQ6YHU6 1953 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 LILRB5O75023 590 aa15.25■□□□□ 0.03
SHMT2-202ENST00000414700 KLHL2O95198 593 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms