RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 LMO2P25791 158 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 AOAHP28039 575 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 NSFP46459 744 aaKnown RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 GRIA4P48058 902 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 MTNR1BP49286 362 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 ERFP50548 548 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 NDST1P52848 882 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 LILRA4P59901 499 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 YPEL5P62699 121 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 RAB1AP62820 205 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 BST1Q10588 318 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 CRY1Q16526 586 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 ZFP1Q6P2D0 407 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 ARCQ7LC44 396 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 NUDCD3Q8IVD9 361 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PHACTR4Q8IZ21 702 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 KDF1Q8NAX2 398 aaPredicted RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 SLC22A8Q8TCC7 542 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 NEIL1Q96FI4 390 aaPredicted RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 COX4I2Q96KJ9 171 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 HNRNPABQ99729 332 aaKnown RBP9.28□□□□□ -0.92
SNHG3-201ENST00000413987 OSBPL6Q9BZF3 934 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 MVB12BQ9H7P6 319 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 OR6C2Q9NZP2 312 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 POMPQ9Y244 141 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 MAN2B2Q9Y2E5 1009 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 PLLPQ9Y342 182 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 FADS3Q9Y5Q0 445 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 AP4B1Q9Y6B7 739 aa9.28□□□□□ -0.92
SNHG3-201ENST00000413987 TDRD15B5MCY1 1934 aaKnown RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ZSCAN5BA6NJL1 495 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SLC22A31A6NKX4 558 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 KPNA7A9QM74 516 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 E5RJQ4 531 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 PIK3R2O00459 728 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TRDMT1O14717 391 aaKnown RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ITM2AO43736 263 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ACSL4O60488 711 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF623O75123 536 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 KRT37O76014 449 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 OR5F1O95221 314 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 CHRM3P20309 590 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 PRDX6P30041 224 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 HTR2BP41595 481 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 BRCC3P46736 316 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 MAPKAPK2P49137 400 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 PRRX1P54821 245 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 BCAR1P56945 870 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TAS2R40P59535 323 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SLC25A3Q00325 362 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 KCNC3Q14003 757 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 NHSL2Q5HYW2 709 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 LRRC38Q5VT99 294 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 POTEHQ6S545 545 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TRIM72Q6ZMU5 477 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ACOT1Q86TX2 421 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 GLIS1Q8NBF1 620 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 KBTBD7Q8WVZ9 684 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 LRRC39Q96DD0 335 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SERAC1Q96JX3 654 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ABHD1Q96SE0 405 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 UHRF1Q96T88 793 aaPredicted RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 PRPF18Q99633 342 aaKnown RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TRIM62Q9BVG3 475 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 FAM49BQ9NUQ9 324 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TBC1D23Q9NUY8 699 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 THAP1Q9NVV9 213 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 POLR3BQ9NW08 1133 aaPredicted RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TJP2Q9UDY2 1190 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SNX6Q9UNH7 406 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 CYP8B1Q9UNU6 501 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 PRG3Q9Y2Y8 225 aaPredicted RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 DERAQ9Y315 318 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 HTR3EA5X5Y0 456 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SNNO75324 88 aaPredicted RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 B3GAT3O94766 335 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 DIRAS3O95661 229 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TP53P04637 393 aaPredicted RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ETS1P14921 441 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF12P17014 697 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF23P17027 643 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SYN1P17600 705 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 PCSK6P29122 969 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 PSMB10P40306 273 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 CAPZA2P47755 286 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 METAP1P53582 386 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 RABGGTBP53611 331 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 EIF3EP60228 445 aaKnown RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 MYBPC1Q00872 1141 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 RELAQ04206 551 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 GPM6BQ13491 265 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 CHI3L2Q15782 390 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TEX44Q53QW1 395 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 TMEM177Q53S58 311 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ZNF628Q5EBL2 1059 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 ZRANB3Q5FWF4 1079 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 RWDD4Q6NW29 188 aaKnown RBP9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SEZ6L2Q6UXD5 910 aa9.27□□□□□ -0.93
SNHG3-201ENST00000413987 SLC26A11Q86WA9 606 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms