RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 PSMC4P43686 418 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TPD52P55327 224 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 BNC1Q01954 994 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 Q0VFX4 171 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE1Q13065 139 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 GAGE4Q13068 117 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TRAF3Q13114 568 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TUBB2AQ13885 445 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 CALCRLQ16602 461 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 LEXMQ3ZCV2 418 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMEM35AQ53FP2 167 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 ZRANB3Q5FWF4 1079 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 RHBDF2Q6PJF5 856 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 FAM198BQ6UWH4 519 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 RAD9BQ6WBX8 426 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TECPR1Q7Z6L1 1165 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMPRSS12Q86WS5 348 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 FAM114A1Q8IWE2 563 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 ADHFE1Q8IWW8 467 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 KLHL7Q8IXQ5 586 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 GBGT1Q8N5D6 347 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 PIGTQ969N2 578 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 MTERF3Q96E29 417 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 STAMBPL1Q96FJ0 436 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 OTUB1Q96FW1 271 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 RMDN2Q96LZ7 410 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TUBB2BQ9BVA1 445 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 FZD8Q9H461 694 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 OCIAD1Q9NX40 245 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 CWC25Q9NXE8 425 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 NPAP1Q9NZP6 1156 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 TBC1D7Q9P0N9 293 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 AMDHD2Q9Y303 409 aa4.62□□□□□ -1.67
HMGB3P31-201ENST00000413333 IGLV5-52A0A0A0MRZ9 124 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 FEZF1A0PJY2 475 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 A4D1N5 150 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 HTR3EA5X5Y0 456 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 OR5K3A6NET4 321 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 TRIM64A6NGJ6 449 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 TRIM64BA6NI03 449 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 ENO4A6NNW6 628 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 CCDC188H7C350 402 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 MID1O15344 667 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 PPFIA2O75334 1257 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 ACSL3O95573 720 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 KRT19P08727 400 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 RAB40ALP0C0E4 278 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 OR2T7P0C7T2 308 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 DANCRP0C864 163 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 MYOD1P15172 320 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 POLR2CP19387 275 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 HOXA11P31270 313 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 KRT2P35908 639 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 TCF7P36402 384 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 GNL1P36915 607 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 SLC9A3P48764 834 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 ZNF155Q12901 538 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 SFMBT2Q5VUG0 894 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 MOXD1Q6UVY6 613 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 MSANTD1Q6ZTZ1 278 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMPRSS11FQ6ZWK6 438 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 TLK2Q86UE8 772 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 FAM219AQ8IW50 185 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 ODF3L1Q8IXM7 274 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 RNF113BQ8IZP6 322 aaKnown RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 SMRP1Q8NCR6 262 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 PAPD5Q8NDF8 572 aaKnown RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 OR5M8Q8NGP6 311 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 BBS10Q8TAM1 723 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 SLC20A1Q8WUM9 679 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 TMED6Q8WW62 240 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 ATL1Q8WXF7 558 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 SMPDL3BQ92485 455 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 CORO2AQ92828 525 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 TANKQ92844 425 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 SCMH1Q96GD3 660 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 HES6Q96HZ4 224 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 DNAI2Q9GZS0 605 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 MIOSQ9NXC5 875 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 MTRRQ9UBK8 725 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 POLLQ9UGP5 575 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 ARMCX3Q9UH62 379 aaPredicted RBP4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 GRIP1Q9Y3R0 1128 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 YIPF1Q9Y548 306 aa4.61□□□□□ -1.67
HMGB3P31-201ENST00000413333 SMTNL1A8MU46 457 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 DNM1LO00429 736 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 PSMD14O00487 310 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 CLDN4O14493 209 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 CRYABP02511 175 aaKnown RBP4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 PRSS2P07478 247 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 ZFYP08048 801 aaPredicted RBP4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 HOXC6P09630 235 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 FAM58BPP0C7Q3 252 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 SUPT20HL2P0C7V6 817 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 ATP6V1B1P15313 513 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 CDC25CP30307 473 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 LIMK1P53667 647 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 MAPK12P53778 367 aa4.6□□□□□ -1.67
HMGB3P31-201ENST00000413333 NANOS3P60323 173 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms