RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 HMX2A2RU54 273 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GMNCA6NCL1 334 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FOXO6A8MYZ6 492 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LMO7DNF2Z398 122 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MKRN2OSH3BPM6 223 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RAD51BO15315 384 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PMPCBO75439 489 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PIAS1O75925 651 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PCDH8O95206 1070 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZWINTO95229 277 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ASMTLO95671 621 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CD160O95971 181 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MT-ND3P03897 115 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PDGFAP04085 211 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CELA2BP08218 269 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HLA-DPA1P20036 260 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ADRA1DP25100 572 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CD86P42081 329 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ARF5P84085 180 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 DSC2Q02487 901 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NSUN2Q08J23 767 aaKnown RBP eCLIP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PDE1CQ14123 709 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZNF235Q14590 738 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CYTH1Q15438 398 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SLC1A5Q15758 541 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PRR30Q53SZ7 412 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PIP5KL1Q5T9C9 394 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TEDDM1Q5T9Z0 273 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FAM46CQ5VWP2 391 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PDPK2PQ6A1A2 396 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PACS1Q6VY07 963 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZNF354CQ86Y25 554 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CNTN4Q8IWV2 1026 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CTAGE3PQ8IX95 158 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 UNC5BQ8IZJ1 945 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 APCDD1Q8J025 514 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 BANPQ8N9N5 519 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 DCAF4L2Q8NA75 395 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PPHLN1Q8NEY8 458 aaKnown RBP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ISL2Q96A47 359 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZNF317Q96PQ6 595 aaPredicted RBP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TRIB3Q96RU7 358 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CPNE1Q99829 537 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 APOL2Q9BQE5 337 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FEM1AQ9BSK4 669 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FSD1LQ9BXM9 530 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SEMA6CQ9H3T2 930 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TREX1Q9NSU2 369 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PIH1D1Q9NWS0 290 aaKnown RBP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NSMCE4AQ9NXX6 385 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 APOBEC3BQ9UH17 382 aaKnown RBP9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RIMKLBQ9ULI2 386 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TCAF1Q9Y4C2 921 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HS3ST3A1Q9Y663 406 aa9.42□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SHANK1Q9Y566 2161 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 HEATR9A2RTY3 570 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MROH6A6NGR9 719 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TRIM49D1C9J1S8 452 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TM9SF1O15321 606 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 INSIG1O15503 277 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ATP9BO43861 1147 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 UGT1A9O60656 530 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RAD1O60671 282 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RFPL1O75677 317 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FAM107AO95990 144 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PAK4O96013 591 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 FGF1P05230 155 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TPH1P17752 444 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KRT4P19013 534 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PSMA3P25788 255 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GP5P40197 560 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ARCN1P48444 511 aaKnown RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SERPINH1P50454 418 aaKnown RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NEK3P51956 506 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CSE1LP55060 971 aaKnown RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 WDR4P57081 412 aaKnown RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MAXP61244 160 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CDK18Q07002 472 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SLC12A1Q13621 1099 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LAMB3Q13751 1172 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 PTK2BQ14289 1009 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NADK2Q4G0N4 442 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 GRTP1Q5TC63 336 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 SP5Q6BEB4 398 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 TTC19Q6DKK2 380 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KIAA0930Q6ICG6 404 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NEK5Q6P3R8 708 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 KYAT3Q6YP21 454 aaKnown RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 LEKR1Q6ZMV7 388 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 RGS9BPQ6ZS82 235 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 NLRP9Q7RTR0 991 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZNF557Q8N988 423 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ACMSDQ8TDX5 336 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 BTN2A2Q8WVV5 523 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 CKAP2Q8WWK9 683 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 OR8D1Q8WZ84 308 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 ZNF669Q96BR6 464 aaPredicted RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MRRFQ96E11 262 aaKnown RBP9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 MFSD3Q96ES6 412 aa9.41□□□□□ -0.9
SOX9-AS1-201ENST00000412640 C5orf34Q96MH7 638 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms