RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 PHC1P78364 1004 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 DUSP4Q13115 394 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 AUHQ13825 339 aaKnown RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 TOP6BLQ8N6T0 577 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 HTRA1Q92743 480 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 SLC5A5Q92911 643 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 HSPA12BQ96MM6 686 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MAPKAP1Q9BPZ7 522 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 CXorf21Q9HAI6 301 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 PLLPQ9Y342 182 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 SALL1Q9NSC2 1324 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 E7ENX8 843 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 RPP40O75818 363 aaKnown RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 RCBTB2O95199 551 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 TRUB2O95900 331 aaKnown RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MT-CO2P00403 227 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 BLKP51451 505 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 LIMK2P53671 638 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 KXD1Q9BQD3 176 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 FAM83DQ9H4H8 585 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MRPL17Q9NRX2 175 aaKnown RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 N6AMT1Q9Y5N5 214 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MYH9P35579 1960 aaKnown RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 PTPRMP28827 1452 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 NRCAMQ92823 1304 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 PLD2O14939 933 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 RARAP10276 462 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 AKR1A1P14550 325 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 FGFR3P22607 806 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 ACVR2AP27037 513 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MAP3K8P41279 467 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 CLCN7P51798 805 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 CD47Q08722 323 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 CCSAPQ6IQ19 270 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 ZYG11AQ6WRX3 759 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 OR52K1Q8NGK4 314 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MOAP1Q96BY2 351 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 ZNF570Q96NI8 536 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 TMEM39BQ9GZU3 492 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 SNX15Q9NRS6 342 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 M0R233 179 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 HCN1O60741 890 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 COQ9O75208 318 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 PRNPP04156 253 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 IDSP22304 550 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 SSTR1P30872 391 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 CCKBRP32239 447 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MASP1P48740 699 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 ST3GAL4Q11206 333 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 MAMLD1Q13495 774 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 DHCR24Q15392 516 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 LINGO2Q7L985 606 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 GALNT15Q8N3T1 639 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 PCDH20Q8N6Y1 951 aaKnown RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 LHX5Q9H2C1 402 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 CUEDC1Q9NWM3 386 aaPredicted RBP7.3□□□□□ -1.24
PTPN3-203ENST00000412145 ALKQ9UM73 1620 aa7.3□□□□□ -1.24
PTPN3-203ENST00000412145 KDM4FA0A1W2PPD8 638 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 BPGMP07738 259 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CDK2P24941 298 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CD86P42081 329 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 SLC9A3P48764 834 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CYP4F2P78329 520 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CYP4F3Q08477 520 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 ITGA7Q13683 1181 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 RAB39AQ14964 217 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 GRIK4Q16099 956 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 S100A16Q96FQ6 103 aaKnown RBP7.29□□□□□ -1.24
PTPN3-203ENST00000412145 SGK2Q9HBY8 427 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 ZNF155Q12901 538 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-203ENST00000412145 PTP4A2Q12974 167 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 ZBED5Q49AG3 693 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 C9orf64Q5T6V5 341 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 GTF2IRD2BQ6EKJ0 949 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 GTF2IRD2Q86UP8 949 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 REPS2Q8NFH8 660 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 GEMIN6Q8WXD5 167 aaKnown RBP7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CSPG4P5Q96PW8 444 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 BCL7BQ9BQE9 202 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 NDC1Q9BTX1 674 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 ABHD16BQ9H3Z7 469 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 GBA2Q9HCG7 927 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-203ENST00000412145 ELOVL2Q9NXB9 296 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CYTH4Q9UIA0 394 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 PCDHGA11Q9Y5H2 935 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 ADGRB3O60242 1522 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CACNA1FO60840 1977 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 MANSC4A6NHS7 340 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-203ENST00000412145 AKAP3O75969 853 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 MAPK12P53778 367 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 SLC18A1P54219 525 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 HSPA14Q0VDF9 509 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 RAPSNQ13702 412 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 WSCD2Q2TBF2 565 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 OGFRL1Q5TC84 451 aaPredicted RBP7.29□□□□□ -1.24
PTPN3-203ENST00000412145 MED27Q6P2C8 311 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 CREG2Q8IUH2 290 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 UBQLNLQ8IYU4 475 aa7.29□□□□□ -1.24
PTPN3-203ENST00000412145 ZNF34Q8IZ26 560 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms