RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 TRABD2BA6NFA1 517 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 H3BMM5 538 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 B4GAT1O43505 415 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 OR1I1O60431 355 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 AMD1P17707 334 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 MAPK9P45984 424 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 ARCN1P48444 511 aaKnown RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 CD151P48509 253 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 PDX1P52945 283 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 SQSTM1Q13501 440 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 CAMK2BQ13554 666 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 TRA2AQ13595 282 aaKnown RBP eCLIP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 BOP1Q14137 746 aaKnown RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 KRT33BQ14525 404 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 SEMA3AQ14563 771 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 RTP5Q14D33 572 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 PLCL1Q15111 1095 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 TMED2Q15363 201 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 RPE65Q16518 533 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 SPANXN3Q5MJ09 141 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 PHF19Q5T6S3 580 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 NEPROQ6NW34 567 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 C8orf74Q6P047 294 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 KLHL35Q6PF15 583 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 LDB1Q86U70 411 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 MARCH9Q86YJ5 346 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 CILP2Q8IUL8 1156 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 LSMEM2Q8N112 164 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 OR4D9Q8NGE8 314 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 WDR36Q8NI36 951 aaKnown RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 ZFPM2Q8WW38 1151 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 RMDN2Q96LZ7 410 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 EBNA1BP2Q99848 306 aaKnown RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 FAM167BQ9BTA0 163 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 CARD6Q9BX69 1037 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 TMEM121BQ9BXQ6 578 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 CCDC86Q9H6F5 360 aaKnown RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 SLC40A1Q9NP59 571 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 C20orf96Q9NUD7 363 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 INTS10Q9NVR2 710 aaKnown RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 MARCH4Q9P2E8 410 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 ATXN7L1Q9ULK2 861 aaPredicted RBP10.67□□□□□ -0.7
CHMP3-205ENST00000409810 SNX24Q9Y343 169 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 MRFAP1Q9Y605 127 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 AK5Q9Y6K8 562 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 FAM169AQ9Y6X4 670 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 CHD8Q9HCK8 2581 aa10.67□□□□□ -0.7
CHMP3-205ENST00000409810 ZCWPW2A0A1B0GU75 182 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 C1QTNF9BB2RNN3 333 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 GOLGA8KD6RF30 607 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 GOLGA8TH3BQL2 631 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 HGSO14964 777 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 KPNA5O15131 536 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 UBXN7O94888 489 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 APOA4P06727 396 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 PROS1P07225 676 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 C1QTNF9P0C862 333 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CD1CP29017 333 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 RPL21P46778 160 aaKnown RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 ADARP55265 1226 aaKnown RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 EIF3BP55884 814 aaKnown RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 GABREP78334 506 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CAV1Q03135 178 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 GPR18Q14330 331 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CRYMQ14894 314 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 C3orf38Q5JPI3 329 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 NKAIN2Q5VXU1 208 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 ZNF470Q6ECI4 717 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CAPRIN2Q6IMN6 1127 aaKnown RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 TMEM71Q6P5X7 295 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 WDR74Q6RFH5 385 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 MICALCLQ6ZW33 695 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 USP53Q70EK8 1073 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 KCNMB4Q86W47 210 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 PLXDC1Q8IUK5 500 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 SLITRK4Q8IW52 837 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 GSDMBQ8TAX9 411 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 ASZ1Q8WWH4 475 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 ATXN7L3BQ96GX2 97 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 FCRL3Q96P31 734 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 INSM2Q96T92 566 aaPredicted RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CMKLR1Q99788 373 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 NUDT22Q9BRQ3 303 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 TBC1D10AQ9BXI6 508 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 FOXP3Q9BZS1 431 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 OR52A5Q9H2C5 316 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CCDC68Q9H2F9 335 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 DPH5Q9H2P9 285 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 MVB12BQ9H7P6 319 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 RDH14Q9HBH5 336 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 DKK4Q9UBT3 224 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 SATB2Q9UPW6 733 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 PCDHGA8Q9Y5G5 932 aa10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CFAP20Q9Y6A4 193 aaKnown RBP10.66□□□□□ -0.7
CHMP3-205ENST00000409810 CTAGE15A4D2H0 777 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 E5RI56 91 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 EIF3HO15372 352 aaKnown RBP eCLIP10.65□□□□□ -0.7
CHMP3-205ENST00000409810 KDM1AO60341 852 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 ESR1P03372 595 aa10.65□□□□□ -0.7
CHMP3-205ENST00000409810 RPN2P04844 631 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms