RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 PCDHGC4Q9Y5F7 938 aa12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 MRPS18BQ9Y676 258 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-205ENST00000409542 ARHGAP42A6NI28 874 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 FOXO6A8MYZ6 492 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 B4E171 279 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 POC1B-GALNT4F8VUJ3 575 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 APOL1O14791 398 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 FGF10O15520 208 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 SPAG6O75602 509 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 ASMTLO95671 621 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 LHCGRP22888 699 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 TSPAN7P41732 249 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 ACTR1BP42025 376 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 MAGEA6P43360 314 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 ACTR1AP61163 376 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 BIRC2Q13490 618 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 KCNJ11Q14654 390 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 MSS51Q4VC12 460 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 DOK6Q6PKX4 331 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 TRPM8Q7Z2W7 1104 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 SPATA21Q7Z572 469 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 ARHGAP22Q7Z5H3 698 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 TSPAN33Q86UF1 283 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 NPWQ8N729 165 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 PLD5Q8N7P1 536 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 GDAP1Q8TB36 358 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 SMIM14Q96QK8 99 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 SMC6Q96SB8 1091 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 WDR83Q9BRX9 315 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 CINPQ9BW66 212 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 ASPSCR1Q9BZE9 553 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 C10orf88Q9H8K7 445 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 GPN2Q9H9Y4 310 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 FGFR1OP2Q9NVK5 253 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 SLC12A4Q9UP95 1085 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 TP53TG5Q9Y2B4 290 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 SLC17A4Q9Y2C5 497 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 ARL2BPQ9Y2Y0 163 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 PCYT1BQ9Y5K3 369 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 ICE1Q9Y2F5 2266 aa12.54□□□□□ -0.4
CHRNA1-205ENST00000409542 GOLGA8MH3BSY2 632 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 H7C0C1 242 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SOD1P00441 154 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 ZFXP17010 805 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 KRT15P19012 456 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 TAC1P20366 129 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 F8A1P23610 371 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 IL4RP24394 825 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 VIPR1P32241 457 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 ATP5OP48047 213 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 MLLT10P55197 1068 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 WDR4P57081 412 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 POLR2LP62875 67 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 MC2RQ01718 297 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SLC10A7Q0GE19 358 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SPARCL1Q14515 664 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SPRED3Q2MJR0 410 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 C16orf46Q6P387 395 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 ADGRD1Q6QNK2 874 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 NPNTQ6UXI9 565 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 Q6ZVL8 140 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 TRIM74Q86UV6 250 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 ANKMY2Q8IV38 441 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 CDKL3Q8IVW4 592 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 NLGN4XQ8N0W4 816 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 PGBD5Q8N414 524 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 PQLC3Q8N755 202 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 PAF1Q8N7H5 531 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 FBXO36Q8NEA4 188 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 NLGN4YQ8NFZ3 816 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SLC37A2Q8TED4 501 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 DTD2Q96FN9 168 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 KCTD15Q96SI1 283 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 SNRNP25Q9BV90 132 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 CD84Q9UIB8 345 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 NPIPB15A6NHN6 443 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 PRR19A6NJB7 356 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 DFFAO00273 331 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 EEF2KO00418 725 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 TYROBPO43914 113 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 RASSF9O75901 435 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 ERCC2P18074 760 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 MAP4P27816 1152 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 CD97P48960 835 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 BASP1P80723 227 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 XRCC4Q13426 336 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 DPYSL2Q16555 572 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 BBS9Q3SYG4 887 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 HP1BP3Q5SSJ5 553 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 FBXW10Q5XX13 1052 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 RAET1GQ6H3X3 334 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 C3orf62Q6ZUJ4 267 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 PALM2Q8IXS6 379 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 GBP7Q8N8V2 638 aaPredicted RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 PDCD6IPQ8WUM4 868 aaKnown RBP12.53□□□□□ -0.4
CHRNA1-205ENST00000409542 STARD8Q92502 1023 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms