RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 MFSD3Q96ES6 412 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 COG4Q9H9E3 785 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 SAMD15Q9P1V8 674 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 PDP2Q9P2J9 529 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 RNF14Q9UBS8 474 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 FREM2Q5SZK8 3169 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 DMXL2Q8TDJ6 3036 aa17.55■□□□□ 0.4
PDLIM2-206ENST00000409141 MAGEB16A2A368 324 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 SDR42E2A6NKP2 422 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 A8MU76 341 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 F8W8V4 182 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 FANCGO15287 622 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 VAPBO95292 243 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 FTH1P02794 183 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 ITIH1P19827 911 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 CSTF2P33240 577 aaKnown RBP eCLIP17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 EIF2S3P41091 472 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 PTGIRP43119 386 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 MAPK10P53779 464 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 PTK6Q13882 451 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 KRT33BQ14525 404 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 ARMC3Q5W041 872 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 CAPRIN2Q6IMN6 1127 aaKnown RBP17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 LDB1Q86U70 411 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 JAMLQ86YT9 394 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 PLXDC1Q8IUK5 500 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 MPP5Q8N3R9 675 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 GPR150Q8NGU9 434 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 SLCO2A1Q92959 643 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 SERPINB12Q96P63 405 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 OGFRQ9NZT2 677 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 MARCH4Q9P2E8 410 aaPredicted RBP17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 KLHL3Q9UH77 587 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 PKD1L2Q7Z442 2459 aa17.54■□□□□ 0.4
PDLIM2-206ENST00000409141 CDRT15L2A8MXV6 281 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 RRP8O43159 456 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 PDHA2P29803 388 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 CASQ1P31415 396 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 TTPAP49638 278 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 PCBP4P57723 403 aaKnown RBP17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 ZNF658BQ4V348 819 aaPredicted RBP17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 LRRC69Q6ZNQ3 347 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 OTUD6BQ8N6M0 293 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 NAT8LQ8N9F0 302 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 AGBL5Q8NDL9 886 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 ELMO1Q92556 727 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 RMDN2Q96LZ7 410 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 RUNDC3BQ96NL0 473 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 HEBP2Q9Y5Z4 205 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 COLEC10Q9Y6Z7 277 aa17.53■□□□□ 0.4
PDLIM2-206ENST00000409141 IFRD1O00458 451 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 LIN7AO14910 233 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 CCL4P13236 92 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 PREPP48147 710 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 DR1Q01658 176 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 RPA4Q13156 261 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 BRD3Q15059 726 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 PLCL1Q15111 1095 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 RNASEH2BQ5TBB1 312 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 DUS1LQ6P1R4 473 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 SYDE1Q6ZW31 735 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 ARHGAP22Q7Z5H3 698 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 SDCCAG8Q86SQ7 713 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 CLEC14AQ86T13 490 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 ZNF248Q8NDW4 579 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 HNRNPLLQ8WVV9 542 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 ZFPM2Q8WW38 1151 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 JPH3Q8WXH2 748 aaPredicted RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 RSC1A1Q92681 617 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 NAF1Q96HR8 494 aaKnown RBP17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 OR52A5Q9H2C5 316 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 PCDHGA7Q9Y5G6 932 aa17.52■□□□□ 0.4
PDLIM2-206ENST00000409141 A0A087WV48 116 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 FAM237BA0A1B0GVD1 139 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 CCDC188H7C350 402 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 DNALI1O14645 258 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 CAPN5O15484 640 aaPredicted RBP17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 NDUFS3O75489 264 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 PAMP19021 973 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 ARNTP27540 789 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 NDUFS1P28331 727 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 SLC5A2P31639 672 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 ETV5P41161 510 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 CD151P48509 253 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 ETF1P62495 437 aaKnown RBP17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 MRNIPQ6NTE8 343 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 KLHL35Q6PF15 583 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 PCGF5Q86SE9 256 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 USP7Q93009 1102 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 TGM7Q96PF1 710 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 FERD3LQ96RJ6 166 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 MAD1L1Q9Y6D9 718 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 WDFY3Q8IZQ1 3526 aa17.51■□□□□ 0.39
PDLIM2-206ENST00000409141 GOLGA8KD6RF30 607 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 GOLGA8TH3BQL2 631 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 PRMT5O14744 637 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 NVLO15381 856 aaKnown RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 KRT37O76014 449 aa17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 FGF3P11487 239 aaPredicted RBP17.5■□□□□ 0.39
PDLIM2-206ENST00000409141 ITGB6P18564 788 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms