RNA–Protein interactions for RNA: ENST00000405805.5

HMGB1-206, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HMGB1, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-206ENST00000405805 ZHX1-C8orf76Q96EF9 292 aa11.79□□□□□ -0.52
HMGB1-206ENST00000405805 MAGEE1Q9HCI5 957 aa11.79□□□□□ -0.52
HMGB1-206ENST00000405805 MIOSQ9NXC5 875 aa11.79□□□□□ -0.52
HMGB1-206ENST00000405805 TYW5A2RUC4 315 aaKnown RBP11.78□□□□□ -0.52
HMGB1-206ENST00000405805 FGF10O15520 208 aaPredicted RBP11.78□□□□□ -0.52
HMGB1-206ENST00000405805 XYLBO75191 536 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 FADS2O95864 444 aaKnown RBP11.78□□□□□ -0.52
HMGB1-206ENST00000405805 MC4RP32245 332 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 CAPGP40121 348 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 HSPA14Q0VDF9 509 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SLC13A2Q13183 592 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 RAB39AQ14964 217 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 PKDCCQ504Y2 493 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SIRPB2Q5JXA9 342 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 CACHD1Q5VU97 1274 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SPRYD7Q5W111 196 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 FAM151BQ6UXP7 276 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 RASAL3Q86YV0 1011 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 EID3Q8N140 333 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 OR8H3Q8N146 312 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 TMEM86AQ8N2M4 240 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 MRGPRX2Q96LB1 330 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 HAPLN3Q96S86 360 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SLC9A7Q96T83 725 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SLC25A51Q9H1U9 297 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 TMEM245Q9H330 911 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SMIM35A0A1B0GVV1 85 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 THRBP10828 461 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 DNAJB2P25686 324 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 KCNC1P48547 511 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 RGS4P49798 205 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 DGKEP52429 567 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 TAF10Q12962 218 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 BNIP2Q12982 314 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 ZBED5Q49AG3 693 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 TECRLQ5HYJ1 363 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 ZC3H12BQ5HYM0 836 aaKnown RBP11.78□□□□□ -0.52
HMGB1-206ENST00000405805 RETREG3Q86VR2 466 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 DENND1CQ8IV53 801 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 TBC1D21Q8IYX1 336 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 DCP1BQ8IZD4 617 aaKnown RBP11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SPPL2AQ8TCT8 520 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 OSBPL2Q9H1P3 480 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 ZNF696Q9H7X3 374 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 GNPTGQ9UJJ9 305 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 DERAQ9Y315 318 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 PIPSLA2A3N6 862 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 H0YJX3 145 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 IRAK2O43187 625 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 RAB15P59190 212 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 HERVK_113P63132 956 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 RHAGQ02094 409 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 LCP2Q13094 533 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 BOP1Q14137 746 aaKnown RBP11.78□□□□□ -0.52
HMGB1-206ENST00000405805 DENND5AQ6IQ26 1287 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SYCE2Q6PIF2 218 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 CYP20A1Q6UW02 462 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 CYS1Q717R9 158 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 ZNF540Q8NDQ6 660 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 PSD4Q8NDX1 1056 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 TRPV3Q8NET8 790 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 GRPEL2Q8TAA5 225 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 TMBIM1Q969X1 311 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 CCDC120Q96HB5 630 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 ERVK-6Q9BXR3 956 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SAV1Q9H4B6 383 aaPredicted RBP11.78□□□□□ -0.52
HMGB1-206ENST00000405805 FKBPLQ9UIM3 349 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 GPSM3Q9Y4H4 160 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 CEPT1Q9Y6K0 416 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 SQORQ9Y6N5 450 aa11.78□□□□□ -0.52
HMGB1-206ENST00000405805 KRBA1A5PL33 1030 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 UPK3BL1B0FP48 263 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 UPK3BL2E5RIL1 263 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 GPR39O43194 453 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 XPNPEP2O43895 674 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 ANXA6P08133 673 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 FMO3P31513 532 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 PPP3CCP48454 512 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 CRYBB1P53674 252 aaPredicted RBP11.77□□□□□ -0.52
HMGB1-206ENST00000405805 CD83Q01151 205 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 FAM174BQ3ZCQ3 159 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 PHACTR4Q8IZ21 702 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 CLDN19Q8N6F1 224 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 SMG8Q8ND04 991 aaKnown RBP11.77□□□□□ -0.52
HMGB1-206ENST00000405805 S100ZQ8WXG8 99 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 MAGED4Q96JG8 741 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 OR52E6Q96RD3 313 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 TTYH2Q9BSA4 534 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 TRMOQ9BU70 441 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 HS3ST4Q9Y661 456 aa11.77□□□□□ -0.52
HMGB1-206ENST00000405805 ARVCFO00192 962 aa11.77□□□□□ -0.53
HMGB1-206ENST00000405805 AKR1A1P14550 325 aa11.77□□□□□ -0.53
HMGB1-206ENST00000405805 WARSP23381 471 aaKnown RBP11.77□□□□□ -0.53
HMGB1-206ENST00000405805 SRP54P61011 504 aaKnown RBP11.77□□□□□ -0.53
HMGB1-206ENST00000405805 RHOAP61586 193 aa11.77□□□□□ -0.53
HMGB1-206ENST00000405805 UNC50Q53HI1 259 aa11.77□□□□□ -0.53
HMGB1-206ENST00000405805 ZNF678Q5SXM1 525 aa11.77□□□□□ -0.53
HMGB1-206ENST00000405805 ARMC12Q5T9G4 340 aa11.77□□□□□ -0.53
HMGB1-206ENST00000405805 DCDC5Q6ZRR9 648 aa11.77□□□□□ -0.53
HMGB1-206ENST00000405805 PIWIL3Q7Z3Z3 882 aaKnown RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms