RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 GIPC2Q8TF65 315 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 RAB2BQ8WUD1 216 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 HDAC2Q92769 488 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 FEM1AQ9BSK4 669 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CRISPLD1Q9H336 500 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 PALMDQ9NP74 551 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SARS2Q9NP81 518 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 TRMT13Q9NUP7 481 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 DNAJB9Q9UBS3 223 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 EIF3LQ9Y262 564 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 PKP3Q9Y446 797 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 POLR3HQ9Y535 204 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SLC30A1Q9Y6M5 507 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 G3V2T6 193 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 GSTA4O15217 222 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 FFAR2O15552 330 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 RGS14O43566 566 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 INHBBP09529 407 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 COL6A1P12109 1028 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF12P17014 697 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 MAP4P27816 1152 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 GSTM2P28161 218 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 AKT1P31749 480 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 YAP1P46937 504 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 HUNKP57058 714 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 RPS24P62847 133 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 NFATC3Q12968 1075 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SKIV2LQ15477 1246 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 ZIK1Q3SY52 487 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 RFTN2Q52LD8 501 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SULT1C3Q6IMI6 304 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SBSNQ6UWP8 590 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 RNF19BQ6ZMZ0 732 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 NECAB2Q7Z6G3 386 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 ITIH5Q86UX2 942 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 RASAL3Q86YV0 1011 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 IFNL1Q8IU54 200 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 EFHBQ8N7U6 833 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 PCSK9Q8NBP7 692 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 SLC13A3Q8WWT9 602 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CEP295NLQ96MC4 621 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 C17orf80Q9BSJ5 609 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 PAIP1Q9H074 479 aaKnown RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 CWH43Q9H720 699 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 IPPKQ9H8X2 491 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 GPN2Q9H9Y4 310 aaPredicted RBP10.57□□□□□ -0.72
CLIP4-204ENST00000404424 BPIFA1Q9NP55 256 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 USE1Q9NZ43 259 aa10.57□□□□□ -0.72
CLIP4-204ENST00000404424 VWA8A3KMH1 1905 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 A0A1B0GVM2 712 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 SLC38A8A6NNN8 435 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 H7C4K7 107 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CBX4O00257 560 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 SLC28A1O00337 649 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 DNAJB5O75953 348 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 VNN2O95498 520 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 GLUD1P00367 558 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 IL6P05231 212 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 RPS3P23396 243 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CRHBPP24387 322 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ELK4P28324 431 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 DGKQP52824 942 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 C21orf59P57076 290 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 GABARAPL2P60520 117 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 TRAF3Q13114 568 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ABRAXAS2Q15018 415 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ANKRD26P1Q6NSI1 321 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 METTL2BQ6P1Q9 378 aaKnown RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 NCEH1Q6PIU2 408 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 PDZD8Q8NEN9 1154 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF555Q8NEP9 628 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 DNAJB8Q8NHS0 232 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 LINC01599Q8WXQ3 324 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ACDQ96AP0 544 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 PLD4Q96BZ4 506 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 RBM4BQ9BQ04 359 aaKnown RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 RBM4Q9BWF3 364 aaKnown RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 GPR62Q9BZJ7 368 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 NAA50Q9GZZ1 169 aaKnown RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 NACA2Q9H009 215 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 FANCEQ9HB96 536 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 IL17CQ9P0M4 197 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 BLOC1S6Q9UL45 172 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CCL27Q9Y4X3 112 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 NEUROG3Q9Y4Z2 214 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 TBC1D4O60343 1298 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 RSL1D1O76021 490 aaKnown RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 WDR47O94967 919 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 SCELO95171 688 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CST1P01037 141 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 HNRNPCP07910 306 aaKnown RBP eCLIP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CNPP09543 421 aaKnown RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CKBP12277 381 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 ZNF7P17097 686 aaPredicted RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 MATN1P21941 496 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 CTGFP29279 349 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 SHMT2P34897 504 aa10.56□□□□□ -0.72
CLIP4-204ENST00000404424 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
CLIP4-204ENST00000404424 RGS4P49798 205 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms