RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 BOLA2-SMG1P6H3BVE0 249 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 PQBP1O60828 265 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 XYLBO75191 536 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 KLKB1P03952 638 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 GPIP06744 558 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 ABCB1P08183 1280 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 VARSP26640 1264 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 HOXD9P28356 352 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 GALNT18Q6P9A2 607 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 C17orf99Q6UX52 265 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 HID1Q8IV36 788 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 COLGALT2Q8IYK4 626 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 RNF175Q8N4F7 328 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 C8orf48Q96LL4 319 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 BBS2Q9BXC9 721 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 EBPLQ9BY08 206 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 RASSF1Q9NS23 344 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 VAPAQ9P0L0 249 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 CD247P20963 164 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 RPL26P61254 145 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 ZBED5Q49AG3 693 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 Q6ZSR9 355 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 TMEM126BQ8IUX1 230 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 SELENOMQ8WWX9 145 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 TOP1MTQ969P6 601 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 LRRC3Q9BY71 257 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 LOC730098B7Z3J9 87 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 COCHO43405 550 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 THRBP10828 461 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF7P17097 686 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 DNAJB1P25685 340 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 HALP42357 657 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 PHKG1Q16816 387 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 CACHD1Q5VU97 1274 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 ZNF621Q6ZSS3 439 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 TMCO5AQ8N6Q1 288 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 FBXO22Q8NEZ5 403 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 CD200R1Q8TD46 325 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 PSKH2Q96QS6 385 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 TRIM54Q9BYV2 358 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 SLC2A11Q9BYW1 496 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 OSBPL6Q9BZF3 934 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 RBM38Q9H0Z9 239 aaKnown RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 MAGEH1Q9H213 219 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 TOR3AQ9H497 397 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 PNMA8BQ9ULN7 279 aaPredicted RBP12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 SQORQ9Y6N5 450 aa12.47□□□□□ -0.41
PPP4R1-202ENST00000400555 AXIN1O15169 862 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 XPNPEP2O43895 674 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 VPS4BO75351 444 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 OAZ2O95190 189 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 GLUD1P00367 558 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 FGF4P08620 206 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 CCT8P50990 548 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 ANKS3Q6ZW76 656 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 EFL1Q7Z2Z2 1120 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 SNX29P2Q8IUI4 249 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 C8orf59Q8N0T1 100 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 ARL14EPQ8N8R7 260 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 DDHD1Q8NEL9 900 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 MYLIPQ8WY64 445 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 ZUFSPQ96AP4 578 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 FUBP3Q96I24 572 aaKnown RBP eCLIP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 TPD52L3Q96J77 140 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 APOLD1Q96LR9 279 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 ELOVL6Q9H5J4 265 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 RUBCNLQ9H714 662 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 AMBNQ9NP70 447 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 FAM234BA2RU67 622 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 hCG_2039718K7EN88 272 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 MAGP20916 626 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 SF1Q15637 639 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 CTSL3PQ5NE16 218 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 AFMIDQ63HM1 303 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 PATL1Q86TB9 770 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 DRAXINQ8NBI3 349 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 RHEBL1Q8TAI7 183 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 FRS2Q8WU20 508 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 TTPALQ9BTX7 342 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 FAM126AQ9BYI3 521 aaPredicted RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 TIMMDC1Q9NPL8 285 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 DNAAF2Q9NVR5 837 aaKnown RBP12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 ARMC1Q9NVT9 282 aa12.46□□□□□ -0.41
PPP4R1-202ENST00000400555 ASPDHA6ND91 283 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 HSD17B1P14061 328 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 TCF3P15923 654 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 ITGALP20701 1170 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 AGXTP21549 392 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 PSMB9P28065 219 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 MAPKAPK2P49137 400 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 CSRP3P50461 194 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 ACLYP53396 1101 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 CRY1Q16526 586 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 CARTPTQ16568 116 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 TXNDC8Q6A555 127 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 LCN8Q6JVE9 175 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 R3HCC1LQ7Z5L2 792 aaKnown RBP12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 ADGRG2Q8IZP9 1017 aa12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 PCSK9Q8NBP7 692 aaKnown RBP12.46□□□□□ -0.42
PPP4R1-202ENST00000400555 SLC47A1Q96FL8 570 aa12.46□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms