RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 EIF2B3Q9NR50 452 aaKnown RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 CCDC167Q9P0B6 97 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 HMGXB4Q9UGU5 601 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PCYOX1Q9UHG3 505 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 LIN7AO14910 233 aaPredicted RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 CASKO14936 926 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 ALOX5P09917 674 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CST5P28325 142 aaPredicted RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 CPA2P48052 419 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 RAPSNQ13702 412 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 LRRC73Q5JTD7 316 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 DUS1LQ6P1R4 473 aaKnown RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 MZT2AQ6P582 158 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 KDM7AQ6ZMT4 941 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.84□□□□□ -1.152e-6■■■■□ 23.7
USP47-203ENST00000399455 FAM92BQ6ZTR7 304 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CHST7Q9NS84 486 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PCDHGA11Q9Y5H2 935 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 MYH13Q9UKX3 1938 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 MYH1P12882 1939 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 KCNJ13O60928 360 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 GPR32O75388 356 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 AP2A2O94973 939 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 LRATO95237 230 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 GNAZP19086 355 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 HRH2P25021 359 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 GRK6P43250 576 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 GJA8P48165 433 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 RPS3AP61247 264 aaKnown RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 DSG1Q02413 1049 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 RAB33AQ14088 237 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CEP78Q5JTW2 689 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 ZNF730Q6ZMV8 503 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 TREML1Q86YW5 311 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CRYBG2Q8N1P7 616 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 LRRC19Q9H756 370 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 C10orf88Q9H8K7 445 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 HCN2Q9UL51 889 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 YJEFN3A6XGL0 299 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 A8MUI8 341 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 E7ENQ6 273 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 GABRDO14764 452 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 SOCS5O75159 536 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 HSMCR30P0CW71 290 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ITGA3P26006 1051 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ACADLP28330 430 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 KCNJ2P63252 427 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 TMEM154Q6P9G4 183 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 KIAA0408Q6ZU52 694 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 OR6C4Q8NGE1 309 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 RPLP0P6Q8NHW5 317 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 HM13Q8TCT9 377 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ZBED6CLQ96FA7 236 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 TEPSINQ96N21 525 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 OLFM1Q99784 485 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 LYARQ9NX58 379 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 FKBPLQ9UIM3 349 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 H3BQ06 376 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 SUV39H1O43463 412 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 PEX11AO75192 247 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 LYNP07948 512 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 LINC00032P0C843 101 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 RPS24P62847 133 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 DHCR24Q15392 516 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 RNASEH2BQ5TBB1 312 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 NUDT13Q86X67 352 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ZNF786Q8N393 782 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 C19orf18Q8NEA5 215 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 GLIS3Q8NEA6 775 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 FBXO25Q8TCJ0 367 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 CAVIN3Q969G5 261 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 VPS35Q96QK1 796 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 C16orf70Q9BSU1 422 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 SNX15Q9NRS6 342 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 IFT80Q9P2H3 777 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 SEC14L3Q9UDX4 400 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 OAS3Q9Y6K5 1087 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 TNFRSF10BO14763 440 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 GRID2O43424 1007 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 SNRPB2P08579 225 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 ANXA4P09525 319 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 HLA-EP13747 358 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 MRPL49Q13405 166 aaKnown RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 GBX1Q14549 363 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ADRM1Q16186 407 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 SLC25A24Q6NUK1 477 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ARCQ7LC44 396 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ADAMTS18Q8TE60 1221 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ZNF483Q8TF39 744 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 C9orf16Q9BUW7 83 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 BTRCQ9Y297 605 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 COCHO43405 550 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 TNFRSF4P43489 277 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 CCNHP51946 323 aaPredicted RBP7.83□□□□□ -1.16
USP47-203ENST00000399455 MC1RQ01726 317 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 EPS8Q12929 822 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 ZFP1Q6P2D0 407 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 FAM13CQ8NE31 585 aa7.83□□□□□ -1.16
USP47-203ENST00000399455 MAFAQ8NHW3 353 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms